FFCP PHASE1:Hg19::chr11:12182490..12182503,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9645 | |EntrezGene=9645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24693 | |HGNC=24693 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNC3 | |UniProt=E9PNC3 | ||
|association_with_transcript=-486bp_to_ENST00000524685_5end | |association_with_transcript=-486bp_to_ENST00000524685_5end | ||
|cluster_id=chr11:12182490..12182503,+ | |||
|description=CAGE_peak_8_at_MICAL2_5end | |description=CAGE_peak_8_at_MICAL2_5end | ||
|id=chr11:12182490..12182503,+ | |id=chr11:12182490..12182503,+ | ||
Latest revision as of 07:14, 16 September 2015
| Short description: | p8@MICAL2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_MICAL2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -486bp_to_ENST00000524685_5end |
| EntrezGene: | MICAL2 |
| HGNC: | 24693 |
| UniProt: | E9PNC3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p8@MICAL2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| vascular associated smooth muscle cell | 3.26e-55 | 32 |
| smooth muscle cell | 3.18e-40 | 43 |
| smooth muscle myoblast | 3.18e-40 | 43 |
| muscle cell | 1.05e-30 | 55 |
| muscle precursor cell | 6.14e-29 | 58 |
| myoblast | 6.14e-29 | 58 |
| multi-potent skeletal muscle stem cell | 6.14e-29 | 58 |
| electrically responsive cell | 2.40e-27 | 61 |
| electrically active cell | 2.40e-27 | 61 |
| smooth muscle cell of the subclavian artery | 2.95e-21 | 5 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| artery | 6.05e-52 | 42 |
| arterial blood vessel | 6.05e-52 | 42 |
| arterial system | 6.05e-52 | 42 |
| systemic artery | 3.68e-41 | 33 |
| systemic arterial system | 3.68e-41 | 33 |
| epithelial tube open at both ends | 6.88e-36 | 59 |
| blood vessel | 6.88e-36 | 59 |
| blood vasculature | 6.88e-36 | 59 |
| vascular cord | 6.88e-36 | 59 |
| epithelial tube | 1.01e-32 | 117 |
Showing 1 to 10 of 66 entries
