FFCP PHASE1:Hg19::chr17:53809473..53809480,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55273 | |EntrezGene=55273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25607 | |HGNC=25607 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NV29 | |UniProt=Q9NV29 | ||
|association_with_transcript=1bp_to_ENST00000299377,NM_001099640,uc002iuk.3_5end | |association_with_transcript=1bp_to_ENST00000299377,NM_001099640,uc002iuk.3_5end | ||
|cluster_id=chr17:53809473..53809480,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_10_at_TMEM100_5end | |description=CAGE_peak_10_at_TMEM100_5end | ||
|id=chr17:53809473..53809480,- | |id=chr17:53809473..53809480,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.52e-50;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0006947!1.93e-13!3;UBERON:0004054!1.93e-13!3;UBERON:0007023!4.50e-11!115;UBERON:0001301!7.40e-11!1;UBERON:0002171!1.30e-10!1;UBERON:0006518!1.30e-10!1;UBERON:0008949!1.30e-10!1;UBERON:0000101!1.30e-10!1;UBERON:0002167!1.30e-10!1;UBERON:0001000!1.43e-10!1;UBERON:0005352!1.43e-10!1;UBERON:0005904!2.62e-10!4;UBERON:0002336!3.29e-10!1;UBERON:0001018!3.29e-10!1;UBERON:0002473!3.29e-10!1;UBERON:0005340!3.29e-10!1;UBERON:0002316!3.29e-10!1;UBERON:0003544!3.29e-10!1;UBERON:0001020!3.29e-10!1;UBERON:0005970!3.29e-10!1;UBERON:0002437!3.29e-10!1;UBERON:0002581!3.61e-10!1;UBERON:0001882!4.33e-10!1;UBERON:0005403!4.33e-10!1;UBERON:0000369!7.48e-10!4;UBERON:0002435!7.48e-10!4;UBERON:0000204!7.48e-10!4;UBERON:0010082!7.48e-10!4;UBERON:0001872!6.02e-08!5 | |ontology_enrichment_uberon=UBERON:0006947!1.93e-13!3;UBERON:0004054!1.93e-13!3;UBERON:0007023!4.50e-11!115;UBERON:0001301!7.40e-11!1;UBERON:0002171!1.30e-10!1;UBERON:0006518!1.30e-10!1;UBERON:0008949!1.30e-10!1;UBERON:0000101!1.30e-10!1;UBERON:0002167!1.30e-10!1;UBERON:0001000!1.43e-10!1;UBERON:0005352!1.43e-10!1;UBERON:0005904!2.62e-10!4;UBERON:0002336!3.29e-10!1;UBERON:0001018!3.29e-10!1;UBERON:0002473!3.29e-10!1;UBERON:0005340!3.29e-10!1;UBERON:0002316!3.29e-10!1;UBERON:0003544!3.29e-10!1;UBERON:0001020!3.29e-10!1;UBERON:0005970!3.29e-10!1;UBERON:0002437!3.29e-10!1;UBERON:0002581!3.61e-10!1;UBERON:0001882!4.33e-10!1;UBERON:0005403!4.33e-10!1;UBERON:0000369!7.48e-10!4;UBERON:0002435!7.48e-10!4;UBERON:0000204!7.48e-10!4;UBERON:0010082!7.48e-10!4;UBERON:0001872!6.02e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.55e-98;1!UBERON:0006947;5.96e-34;3!UBERON:0004054;5.96e-34;3!UBERON:0005904;7.14e-26;4!UBERON:0000058;3.02e-11;10!UBERON:0003135;2.37e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.55e-98,1;UBERON:0006947,5.96e-34,3;UBERON:0004054,5.96e-34,3;UBERON:0005904,7.14e-26,4;UBERON:0005103,1.07e-13,8;UBERON:0000083,1.07e-13,8;UBERON:0009201,1.07e-13,8;UBERON:0006553,1.07e-13,8;UBERON:0003074,1.07e-13,8;UBERON:0003060,1.07e-13,8;UBERON:0000080,2.45e-12,9;UBERON:0002120,2.45e-12,9;UBERON:0004875,2.45e-12,9;UBERON:0005721,2.45e-12,9;UBERON:0005754,2.45e-12,9;UBERON:0007297,2.45e-12,9;UBERON:0003135,2.37e-10,11;UBERON:0004876,2.37e-10,11;UBERON:0003887,1.33e-09,12;UBERON:0006555,1.54e-07,16;UBERON:0004819,1.54e-07,16 | |||
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|short_description=p10@TMEM100 | |short_description=p10@TMEM100 | ||
}} | }} |
Latest revision as of 07:25, 16 September 2015
Short description: | p10@TMEM100 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TMEM100_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 1bp_to_ENST00000299377, NM_001099640, uc002iuk.3_5end |
EntrezGene: | TMEM100 |
HGNC: | 25607 |
UniProt: | Q9NV29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 2.55e-98 | 1 |
male genital duct | 5.96e-34 | 3 |
internal male genitalia | 5.96e-34 | 3 |
duct of male reproductive system | 7.14e-26 | 4 |
mesonephric epithelium | 1.07e-13 | 8 |
mesonephric tubule | 1.07e-13 | 8 |
nephric duct | 1.07e-13 | 8 |
renal duct | 1.07e-13 | 8 |
mesonephric duct | 1.07e-13 | 8 |
pronephric duct | 1.07e-13 | 8 |
mesonephros | 2.45e-12 | 9 |
pronephros | 2.45e-12 | 9 |
nephrogenic cord | 2.45e-12 | 9 |
pronephric mesoderm | 2.45e-12 | 9 |
rostral part of nephrogenic cord | 2.45e-12 | 9 |
presumptive pronephric mesoderm | 2.45e-12 | 9 |
male reproductive organ | 2.37e-10 | 11 |
urogenital ridge | 2.37e-10 | 11 |
intraembryonic coelom | 1.33e-09 | 12 |
excretory tube | 1.54e-07 | 16 |
kidney epithelium | 1.54e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-08 | 14 |