FFCP PHASE1:Hg19::chr20:42816127..42816140,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:42816127..42816140,-
|short_description=p3@JPH2
|description=CAGE_peak_3_at_JPH2_5end
|association_with_transcript=77bp_to_ENST00000372980,NM_020433,NM_17...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57158 | |EntrezGene=57158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14202 | |HGNC=14202 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BR39,Q86VZ3 | |UniProt=Q9BR39,Q86VZ3 | ||
|association_with_transcript=77bp_to_ENST00000372980,NM_020433,NM_175913,uc002xli.1,uc002xlj.2_5end | |||
|cluster_id=chr20:42816127..42816140,- | |||
|description=CAGE_peak_3_at_JPH2_5end | |||
|id=chr20:42816127..42816140,- | |||
|ontology_enrichment_celltype=CL:0002620!4.92e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.29e-27;19!CL:0002577;1.18e-14;3!CL:0002623;4.06e-13;3!CL:0002536;1.75e-10;2!CL:0000575;1.22e-09;2!CL:0002537;5.23e-09;5!CL:0000622;4.64e-08;5!CL:0002541;4.02e-07;3!CL:0000154;8.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.12e-27,19;CL:0002577,1.18e-14,3;CL:0002623,4.83e-13,3;CL:0002536,1.76e-10,2;CL:0000575,6.20e-10,2;CL:0002537,5.25e-09,5;CL:0000622,5.14e-08,5;CL:0002541,3.74e-07,3;CL:0000154,9.49e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.15e-14!14;UBERON:0000158!6.15e-14!14;UBERON:0004923!7.50e-12!57;UBERON:0003102!2.74e-11!95;UBERON:0002097!5.31e-10!40;UBERON:0000478!8.81e-10!24;UBERON:0000062!1.61e-09!511;UBERON:0002199!3.85e-09!45;UBERON:0002416!3.85e-09!45;UBERON:0003124!5.76e-09!7;UBERON:0004121!3.17e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.24e-22;10!UBERON:0000158;4.24e-22;10!UBERON:0000478;4.83e-21;24!UBERON:0000305;1.13e-16;7!UBERON:0001044;2.54e-11;6!UBERON:0003293;2.54e-11;6!UBERON:0003294;2.54e-11;6!UBERON:0010047;2.54e-11;6!UBERON:0003408;2.54e-11;6!UBERON:0000167;2.54e-11;6!UBERON:0001987;4.21e-11;4!UBERON:0001041;3.07e-07;14!UBERON:0003124;4.02e-07;3!UBERON:0000920;4.02e-07;3!UBERON:0003688;6.08e-07;6!UBERON:0002358;6.08e-07;6!UBERON:0003684;6.08e-07;6!UBERON:0001178;6.08e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.55e-31,14;UBERON:0000158,1.55e-31,14;UBERON:0000478,5.76e-21,24;UBERON:0000305,1.13e-16,7;UBERON:0003124,1.61e-16,7;UBERON:0004871,1.51e-14,8;UBERON:0004923,7.17e-12,66;UBERON:0001044,3.75e-11,6;UBERON:0003293,3.75e-11,6;UBERON:0003294,3.75e-11,6;UBERON:0010047,3.75e-11,6;UBERON:0000167,3.75e-11,6;UBERON:0001987,4.22e-11,4;UBERON:0004340,4.22e-11,4;UBERON:0000920,3.74e-07,3;UBERON:0003408,9.96e-07,10 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,2.23480547213644,0.872338524100369,2.53299878168311,0,0,0,0,8.08233076881637,5.27533956456907,0,0,0,0,0,0,0.246242116153576,1.63200552995402,0.313454721478088,0,0.273748850145768,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,2.5500670180478,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0.468642863667593,0,0,0,0,0.809364721840658,0.561803226808994,0,0.737005903870608,0.103325781175765,0,0,0,0,0.673344455816265,0.125118519871964,0,0,0,0,0,1.79389635688862,0.640672166455702,0.211931901159562,0.900273288253207,0.515262646192195,0.257640540045629,0,0.675105328965065,0.0974370051611986,0.504867548488229,0.460249493211497,0.323292113637624,1.42003837006646,0.806016785821122,0.67824236924195,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,4.14404764057442,0.464367928031979,0,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.219500570817251,1.1240175325762,1.70899253099772,0.925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0.335964256397719,0,0.447792613514241,0.290633938513962,0.766765358330422,0,0,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0,1.08524321078289,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.892144943985809,1.73472656537328,0.819989904948992,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0,0,0,3.63753085735511,3.32870879020994,14.212343786495,0,0,0,0.384417447767103,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0.223874754722178,0,0,0,0.984043937099117,0,0,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589494246078727,0,0,0,0,0.379473173765715,0,0,0,0,0,0,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58116727106535,7.12715233998333,6.75753544618311,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0.715880777515084,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.538651809526579,0.455768223388005,0,0.0897576444097721,0,4.78501739597879,0.641183153813036,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881931576729399,2.26353937109047,0.34945333648406,0.51595809741485,0,0,0,0.872901148395775,0,0,0,0,0,0.586654148204409,0.320635281006135,0.426905989478705,1.79828648623917,0,0,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0.407992870545287,0,0,0.273810757783986,0,0.429765441419957,0,0.558564802544508,0.916641696046735,0,0,0.858452096273142,0.669514372325618,2.01550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1110671705139,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,1.14681839138014,0,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.796191777397232,1.60011105865261,0,0,0,0.57785949122191,0.428883182749851,0,0.226705925512272,0.231522474323834,0.244736704506468,0,0,1.31570429747224,1.41351316756705,0.192914038270915,0.675769762612291,0,0.690860683462397,2.12701969324168,0,0,0,0,3.27609848846413,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0.3062454773532,0.128458450192919,0,0,0.205116364240755,0,0,0,0,0,0,1.10057159113007,0,0,0,0.198916222116275,0.0752103283492573,1.41193548092464,0,0,1.96526301012116,0,0,0,0,0,0,1.09651553371436,1.48863353516788,0,0,0,0,0,0.227662191351298,0.443511850813194,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0.215927591218621,2.38875843943525,0.428859265059938,0,0,0.173858272302579,0,1.45051314914126,1.53646629384555,1.38251932362818,0,0,0,0.846774100381858,0.68732060563215,0,0,0,0,0,0.647428837187895,0.513314034281235,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.588925401344836,0.297046400327086,0,0.169927114687817,0,0,0,0,0,0,0,0,0.860037498908708,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0.829169439458779,0,1.49263787330687,0.476128862927481,0,0,1.79410980128981,0.0636471582781649,0,0.870866991587845,0.684466602170562,0.134704106029175,0.28688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| ||
|short_description=p3@JPH2 | |||
}} | }} |
Latest revision as of 07:32, 16 September 2015
Short description: | p3@JPH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_JPH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_ENST00000372980, NM_020433, NM_175913, uc002xli.1, uc002xlj.2_5end |
EntrezGene: | JPH2 |
HGNC: | 14202 |
UniProt: | Q9BR39Q86VZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.12e-27 | 19 |
placental epithelial cell | 1.18e-14 | 3 |
acinar cell of salivary gland | 4.83e-13 | 3 |
amniotic epithelial cell | 1.76e-10 | 2 |
corneal epithelial cell | 6.20e-10 | 2 |
amnion mesenchymal stem cell | 5.25e-09 | 5 |
acinar cell | 5.14e-08 | 5 |
chorionic membrane mesenchymal stem cell | 3.74e-07 | 3 |
protein secreting cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.55e-31 | 14 |
membranous layer | 1.55e-31 | 14 |
extraembryonic structure | 5.76e-21 | 24 |
amnion | 1.13e-16 | 7 |
chorion | 1.61e-16 | 7 |
somatic layer of lateral plate mesoderm | 1.51e-14 | 8 |
organ component layer | 7.17e-12 | 66 |
saliva-secreting gland | 3.75e-11 | 6 |
gland of oral region | 3.75e-11 | 6 |
gland of foregut | 3.75e-11 | 6 |
oral gland | 3.75e-11 | 6 |
oral cavity | 3.75e-11 | 6 |
placenta | 4.22e-11 | 4 |
allantois | 4.22e-11 | 4 |
egg chorion | 3.74e-07 | 3 |
gland of gut | 9.96e-07 | 10 |