FFCP PHASE1:Hg19::chr19:15590299..15590304,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114770 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30013 | |||
|TSSclassifier=strong | |||
|UniProt=Q96PD5 | |||
|association_with_transcript=10bp_to_NM_052890,uc002nbf.3,uc002nbg.3_5end | |||
|cluster_id=chr19:15590299..15590304,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_PGLYRP2_5end | |||
|id=chr19:15590299..15590304,- | |||
|ontology_enrichment_celltype=CL:0000181!2.97e-12!12;CL:0000417!2.97e-12!12;CL:0000668!2.97e-12!12;CL:0000414!2.97e-12!12;CL:0000412!2.97e-12!12;CL:0000182!2.97e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.56e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.73e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.41e-10;11!UBERON:0009497;1.34e-08;13 | |||
|ontology_enrichment_disease=DOID:114!8.09e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.33e-20!19;UBERON:0006925!2.33e-20!19;UBERON:0008836!2.33e-20!19;UBERON:0008835!1.34e-17!22;UBERON:0003894!1.34e-17!22;UBERON:0009854!7.76e-17!23;UBERON:0006122!2.25e-16!1;UBERON:0007499!1.70e-15!25;UBERON:0009497!1.70e-15!25;UBERON:0000015!1.70e-15!25;UBERON:0002423!1.70e-15!25;UBERON:0006235!1.70e-15!25;UBERON:0004161!1.70e-15!25;UBERON:0005057!6.67e-15!26;UBERON:0009856!6.67e-15!26;UBERON:0002365!1.66e-12!31;UBERON:0002330!1.66e-12!31;UBERON:0002368!4.45e-11!35;UBERON:0002950!7.49e-09!2;UBERON:0001891!7.49e-09!2;UBERON:0009616!7.49e-09!2;UBERON:0000949!1.30e-08!45;UBERON:0000473!1.47e-08!8;UBERON:0003929!3.62e-07!54;UBERON:0005172!4.90e-07!55;UBERON:0005173!4.90e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.51e-33;19!UBERON:0006925;9.51e-33;19!UBERON:0002423;5.36e-25;25!UBERON:0002365;3.51e-20;31!UBERON:0002330;3.51e-20;31!UBERON:0002368;1.90e-17;33!UBERON:0000949;1.11e-12;43!UBERON:0005172;3.55e-09;52!UBERON:0005173;3.55e-09;52!UBERON:0002417;3.98e-07;58!UBERON:0000916;3.98e-07;58!UBERON:0002530;9.94e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.05e-32,19;UBERON:0006925,1.05e-32,19;UBERON:0008836,1.05e-32,19;UBERON:0008835,2.61e-28,22;UBERON:0003894,2.61e-28,22;UBERON:0009854,4.25e-27,23;UBERON:0007499,5.78e-25,25;UBERON:0009497,5.78e-25,25;UBERON:0000015,5.78e-25,25;UBERON:0002423,5.78e-25,25;UBERON:0006235,5.78e-25,25;UBERON:0004161,5.78e-25,25;UBERON:0009856,5.08e-24,26;UBERON:0002365,3.29e-20,31;UBERON:0002330,3.29e-20,31;UBERON:0002368,6.10e-18,35;UBERON:0000949,5.03e-14,45;UBERON:0003929,9.86e-12,54;UBERON:0005172,9.86e-12,54;UBERON:0005173,9.86e-12,54;UBERON:0002530,9.29e-11,59;UBERON:0002417,1.39e-10,60;UBERON:0000916,1.39e-10,60;UBERON:0005911,8.56e-08,82;UBERON:0001041,2.36e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7457048750563,4.91413608338813,6.49868897349544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59462474545423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.91382061861645,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,1.60778478093707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@PGLYRP2 | |||
}} |
Latest revision as of 07:53, 16 September 2015
Short description: | p4@PGLYRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PGLYRP2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 10bp_to_NM_052890, uc002nbf.3, uc002nbg.3_5end |
EntrezGene: | PGLYRP2 |
HGNC: | 30013 |
UniProt: | Q96PD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.73e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.05e-32 | 19 |
digestive gland | 1.05e-32 | 19 |
liver bud | 1.05e-32 | 19 |
hepatic diverticulum | 2.61e-28 | 22 |
liver primordium | 2.61e-28 | 22 |
digestive tract diverticulum | 4.25e-27 | 23 |
epithelial sac | 5.78e-25 | 25 |
epithelium of foregut-midgut junction | 5.78e-25 | 25 |
anatomical boundary | 5.78e-25 | 25 |
hepatobiliary system | 5.78e-25 | 25 |
foregut-midgut junction | 5.78e-25 | 25 |
septum transversum | 5.78e-25 | 25 |
sac | 5.08e-24 | 26 |
exocrine gland | 3.29e-20 | 31 |
exocrine system | 3.29e-20 | 31 |
endocrine gland | 6.10e-18 | 35 |
endocrine system | 5.03e-14 | 45 |
gut epithelium | 9.86e-12 | 54 |
abdomen element | 9.86e-12 | 54 |
abdominal segment element | 9.86e-12 | 54 |
gland | 9.29e-11 | 59 |
abdominal segment of trunk | 1.39e-10 | 60 |
abdomen | 1.39e-10 | 60 |
endo-epithelium | 8.56e-08 | 82 |
foregut | 2.36e-07 | 87 |