FFCP PHASE1:Hg19::chr2:241810780..241810791,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=189 | |EntrezGene=189 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=341 | |HGNC=341 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=174bp_to_ENST00000476698_5end | |association_with_transcript=174bp_to_ENST00000476698_5end | ||
|cluster_id=chr2:241810780..241810791,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_AGXT_5end | |description=CAGE_peak_3_at_AGXT_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!5.16e-16!12;CL:0000417!5.16e-16!12;CL:0000668!5.16e-16!12;CL:0000414!5.16e-16!12;CL:0000412!5.16e-16!12;CL:0000182!5.16e-16!12 | |ontology_enrichment_celltype=CL:0000181!5.16e-16!12;CL:0000417!5.16e-16!12;CL:0000668!5.16e-16!12;CL:0000414!5.16e-16!12;CL:0000412!5.16e-16!12;CL:0000182!5.16e-16!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.77e-09;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.77e-09;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.77e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.42e-10;11!UBERON:0009497;1.13e-08;13 | |ontology_enrichment_development_v019=UBERON:0004161;4.42e-10;11!UBERON:0009497;1.13e-08;13 | ||
|ontology_enrichment_disease=DOID:178!6.06e-13!1;DOID:326!6.06e-13!1;DOID:3978!6.06e-13!1;DOID:3394!6.06e-13!1;DOID:5844!6.06e-13!1;DOID:114!4.17e-07!2 | |ontology_enrichment_disease=DOID:178!6.06e-13!1;DOID:326!6.06e-13!1;DOID:3978!6.06e-13!1;DOID:3394!6.06e-13!1;DOID:5844!6.06e-13!1;DOID:114!4.17e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.66e-22!19;UBERON:0006925!3.66e-22!19;UBERON:0008836!3.66e-22!19;UBERON:0008835!4.19e-19!22;UBERON:0003894!4.19e-19!22;UBERON:0009854!2.92e-18!23;UBERON:0007499!8.89e-17!25;UBERON:0009497!8.89e-17!25;UBERON:0000015!8.89e-17!25;UBERON:0002423!8.89e-17!25;UBERON:0006235!8.89e-17!25;UBERON:0004161!8.89e-17!25;UBERON:0005057!4.04e-16!26;UBERON:0009856!4.04e-16!26;UBERON:0002365!1.81e-13!31;UBERON:0002330!1.81e-13!31;UBERON:0001301!6.82e-13!1;UBERON:0007190!8.64e-13!1;UBERON:0002368!6.86e-12!35;UBERON:0005172!6.17e-10!55;UBERON:0005173!6.17e-10!55;UBERON:0000949!3.64e-09!45;UBERON:0002417!6.77e-09!61;UBERON:0000916!6.77e-09!61;UBERON:0003929!1.43e-07!54;UBERON:0002530!6.80e-07!59 | |ontology_enrichment_uberon=UBERON:0002107!3.66e-22!19;UBERON:0006925!3.66e-22!19;UBERON:0008836!3.66e-22!19;UBERON:0008835!4.19e-19!22;UBERON:0003894!4.19e-19!22;UBERON:0009854!2.92e-18!23;UBERON:0007499!8.89e-17!25;UBERON:0009497!8.89e-17!25;UBERON:0000015!8.89e-17!25;UBERON:0002423!8.89e-17!25;UBERON:0006235!8.89e-17!25;UBERON:0004161!8.89e-17!25;UBERON:0005057!4.04e-16!26;UBERON:0009856!4.04e-16!26;UBERON:0002365!1.81e-13!31;UBERON:0002330!1.81e-13!31;UBERON:0001301!6.82e-13!1;UBERON:0007190!8.64e-13!1;UBERON:0002368!6.86e-12!35;UBERON:0005172!6.17e-10!55;UBERON:0005173!6.17e-10!55;UBERON:0000949!3.64e-09!45;UBERON:0002417!6.77e-09!61;UBERON:0000916!6.77e-09!61;UBERON:0003929!1.43e-07!54;UBERON:0002530!6.80e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.09e-21;19!UBERON:0006925;2.09e-21;19!UBERON:0002423;2.12e-16;25!UBERON:0002365;3.43e-13;31!UBERON:0002330;3.43e-13;31!UBERON:0002368;4.00e-11;33!UBERON:0000949;4.27e-08;43 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.09e-21;19!UBERON:0006925;2.09e-21;19!UBERON:0002423;2.12e-16;25!UBERON:0002365;3.43e-13;31!UBERON:0002330;3.43e-13;31!UBERON:0002368;4.00e-11;33!UBERON:0000949;4.27e-08;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.09e-21,19;UBERON:0006925,2.09e-21,19;UBERON:0008836,2.09e-21,19;UBERON:0008835,1.45e-18,22;UBERON:0003894,1.45e-18,22;UBERON:0009854,8.82e-18,23;UBERON:0007499,2.12e-16,25;UBERON:0009497,2.12e-16,25;UBERON:0000015,2.12e-16,25;UBERON:0002423,2.12e-16,25;UBERON:0006235,2.12e-16,25;UBERON:0004161,2.12e-16,25;UBERON:0009856,8.64e-16,26;UBERON:0002365,2.53e-13,31;UBERON:0002330,2.53e-13,31;UBERON:0002368,7.47e-12,35;UBERON:0000949,2.59e-09,45;UBERON:0003929,8.01e-08,54;UBERON:0005172,8.01e-08,54;UBERON:0005173,8.01e-08,54;UBERON:0002530,3.45e-07,59;UBERON:0002417,4.48e-07,60;UBERON:0000916,4.48e-07,60 | |||
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|short_description=p3@AGXT | |short_description=p3@AGXT | ||
}} | }} |
Latest revision as of 09:03, 16 September 2015
Short description: | p3@AGXT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AGXT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 174bp_to_ENST00000476698_5end |
EntrezGene: | AGXT |
HGNC: | 341 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.77e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.09e-21 | 19 |
digestive gland | 2.09e-21 | 19 |
liver bud | 2.09e-21 | 19 |
hepatic diverticulum | 1.45e-18 | 22 |
liver primordium | 1.45e-18 | 22 |
digestive tract diverticulum | 8.82e-18 | 23 |
epithelial sac | 2.12e-16 | 25 |
epithelium of foregut-midgut junction | 2.12e-16 | 25 |
anatomical boundary | 2.12e-16 | 25 |
hepatobiliary system | 2.12e-16 | 25 |
foregut-midgut junction | 2.12e-16 | 25 |
septum transversum | 2.12e-16 | 25 |
sac | 8.64e-16 | 26 |
exocrine gland | 2.53e-13 | 31 |
exocrine system | 2.53e-13 | 31 |
endocrine gland | 7.47e-12 | 35 |
endocrine system | 2.59e-09 | 45 |
gut epithelium | 8.01e-08 | 54 |
abdomen element | 8.01e-08 | 54 |
abdominal segment element | 8.01e-08 | 54 |
gland | 3.45e-07 | 59 |
abdominal segment of trunk | 4.48e-07 | 60 |
abdomen | 4.48e-07 | 60 |