FFCP PHASE1:Hg19::chr11:123301167..123301182,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=E9PS84 | |||
|association_with_transcript=109bp_to_ENST00000533341,uc001pyu.2_5end | |||
|cluster_id=chr11:123301167..123301182,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_9_at_ENST00000533341_5end,CAGE_peak_9_at_uc001pyu.2_5end | |||
|id=chr11:123301167..123301182,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.31e-22!119;CL:0000738!2.77e-21!140;CL:0000988!7.36e-20!182;CL:0000037!4.33e-19!172;CL:0000566!4.33e-19!172;CL:0002031!1.31e-18!124;CL:0002032!1.73e-16!165;CL:0000837!1.73e-16!165;CL:0000860!1.11e-15!45;CL:0002194!1.82e-15!63;CL:0000576!1.82e-15!63;CL:0000040!1.82e-15!63;CL:0000559!1.82e-15!63;CL:0002009!1.31e-14!65;CL:0000766!1.19e-13!76;CL:0002057!2.13e-13!42;CL:0000839!1.07e-12!70;CL:0000557!2.37e-12!71;CL:0000763!5.42e-10!112;CL:0000049!5.42e-10!112;CL:0000084!1.74e-09!25;CL:0000827!1.74e-09!25;CL:0000838!3.37e-07!52;CL:0000542!6.27e-07!53;CL:0000051!6.27e-07!53;CL:0000791!6.73e-07!18;CL:0000789!6.73e-07!18;CL:0002420!6.73e-07!18;CL:0002419!6.73e-07!18;CL:0000790!6.73e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.90e-27;3!CL:0000875;1.68e-12;3!CL:0002396;1.68e-12;3!CL:0000895;5.29e-10;1!CL:0000084;1.61e-08;25!CL:0000451;6.98e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.98e-27,3;CL:0000875,1.68e-12,3;CL:0002396,1.68e-12,3;CL:0000810,3.10e-10,1;CL:0000895,3.10e-10,1;CL:0002436,3.10e-10,1;CL:0002427,3.10e-10,1;CL:0002428,3.10e-10,1;CL:0002429,3.10e-10,1;CL:0002433,3.10e-10,1;CL:0002431,3.10e-10,1;CL:0002432,3.10e-10,1;CL:0000084,1.39e-08,25;CL:0000827,1.39e-08,25;CL:0000451,7.86e-08,10;CL:0000738,3.32e-07,136;CL:0000624,9.42e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002427;5.29e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;5.29e-10;1!DOID:0060061;5.29e-10;1!DOID:8691;5.29e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.59e-10,1;DOID:0060061,2.59e-10,1;DOID:8691,2.59e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.66e-18!102;UBERON:0003061!2.66e-18!102;UBERON:0002193!1.26e-16!112;UBERON:0002371!3.29e-12!80;UBERON:0002405!1.44e-10!115;UBERON:0001474!1.71e-10!86;UBERON:0004177!1.93e-07!7;UBERON:0004765!3.08e-07!101;UBERON:0001434!3.08e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.09e-18;2!UBERON:0005058;1.09e-18;2!UBERON:0009113;1.09e-18;2!UBERON:0004177;5.11e-08;5!UBERON:0005057;5.11e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.72e-20,4;UBERON:0005058,1.72e-20,4;UBERON:0009113,1.72e-20,4;UBERON:0003295,1.72e-20,4;UBERON:0005562,1.72e-20,4;UBERON:0003351,7.31e-14,6;UBERON:0004177,5.83e-12,7;UBERON:0005057,5.83e-12,7;UBERON:0000974,1.60e-08,10;UBERON:0003408,1.60e-08,10;UBERON:0001042,1.60e-08,10;UBERON:0009145,1.60e-08,10;UBERON:0006562,8.63e-08,11;UBERON:0009722,8.63e-08,11;UBERON:0007690,8.63e-08,11 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.236132343941038,0.393364276848904,1.91914699048606,0.77408061658038,0,0,0,0,0,0.880801318004542,0,0,0.217010870715852,0.671746422719773,0.32389366601898,0.257575567634187,0.145398238779565,0,0.485168122375632,0,0.822335776043652,0,0.575384784644301,1.5369642391746,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0.612167784741805,0.962787081228281,0,0.659702600373432,0.199463657621632,0.426224750532694,0,0,0,0.502497330513487,0,0.65156653411535,0,0.368277635987565,0.316462387440884,0.211255286311942,0.850417199860174,0.419317291016752,0.336985893439485,0.150176892841506,0,1.14005097496499,1.39241674039363,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.786839080455332,1.17903228824749,0.616804496998528,0.167186495390678,0,0,0,0.891283655081389,0,0.443067789167242,1.08321545506006,1.0247305578054,0.390178042679635,1.15106533222573,0.276350017785848,0.289803085735052,0.593146252648242,1.07016331235885,0,0.679856056185397,1.53288197440768,0.68725489096526,0.253019692019503,0.95569624297229,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,1.41124720257313,0.534880391567015,0.434473211648397,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,10.7320780937404,5.71994910780128,1.11437250398869,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0.473227200159376,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0.539325232640658,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0.591092280605782,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0,0.960548020230999,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822724546172388,0,0,0.79312517629427,0.213648142254946,0,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0.684704037099577,0,2.50634477090067,0,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0.223676107892416,0.333698283423817,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0.557216921387392,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.86494757262552,0.522109747527277,0.202203398942031,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0.103688191397247,0,0.330991955875499,0,1.19472429772959,0,0,0,0,0,0.17472666824203,0,0.387025325156341,0.877071805034227,0.492692742319255,0,0,0.225980740780532,0.411125773940253,0.397429223405979,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0.677386656526276,0,0.408610218334727,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,0.511164065356265,0.226624183040251,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,1.79988656269437,0.106691729694141,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12815492523886,0,0,0,0.163771917510097,0,0,0,0,0.126831620387814,0,0,0,0,0,0.535701835878287,0,0,0,0.177404740325278,0,0.171488009437418,0.0679697329768317,0,0.590969204419841,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0.301925687133347,0.231522474323834,0,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0,0.281951753939561,0.257831551894309,0.299823467774787,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,1.162600377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| |||
|short_description=p9@ENST00000533341,p9@uc001pyu.2 | |||
}} |
Latest revision as of 09:27, 16 September 2015
Short description: | p9@ENST00000533341, p9@uc001pyu.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ENST00000533341_5end, CAGE_peak_9_at_uc001pyu.2_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 109bp_to_ENST00000533341, uc001pyu.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.98e-27 | 3 |
non-classical monocyte | 1.68e-12 | 3 |
CD14-low, CD16-positive monocyte | 1.68e-12 | 3 |
CD4-positive, alpha-beta thymocyte | 3.10e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.10e-10 | 1 |
mature CD4 single-positive thymocyte | 3.10e-10 | 1 |
resting double-positive thymocyte | 3.10e-10 | 1 |
double-positive blast | 3.10e-10 | 1 |
CD69-positive double-positive thymocyte | 3.10e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.10e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.10e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.10e-10 | 1 |
T cell | 1.39e-08 | 25 |
pro-T cell | 1.39e-08 | 25 |
dendritic cell | 7.86e-08 | 10 |
leukocyte | 3.32e-07 | 136 |
CD4-positive, alpha-beta T cell | 9.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.72e-20 | 4 |
hemolymphoid system gland | 1.72e-20 | 4 |
thymic region | 1.72e-20 | 4 |
pharyngeal gland | 1.72e-20 | 4 |
thymus primordium | 1.72e-20 | 4 |
pharyngeal epithelium | 7.31e-14 | 6 |
hemopoietic organ | 5.83e-12 | 7 |
immune organ | 5.83e-12 | 7 |
neck | 1.60e-08 | 10 |
gland of gut | 1.60e-08 | 10 |
chordate pharynx | 1.60e-08 | 10 |
pharyngeal region of foregut | 1.60e-08 | 10 |
pharynx | 8.63e-08 | 11 |
entire pharyngeal arch endoderm | 8.63e-08 | 11 |
early pharyngeal endoderm | 8.63e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.59e-10 | 1 |
cutaneous T cell lymphoma | 2.59e-10 | 1 |
mycosis fungoides | 2.59e-10 | 1 |