FFCP PHASE1:Hg19::chr17:56084912..56084925,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6426 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10780 | |||
|TSSclassifier=strong | |||
|UniProt=Q07955,Q59FA2 | |||
|association_with_transcript=-205bp_to_ENST00000258962,NM_001078166,NM_006924,NR_034041,uc002ivi.2,uc002ivj.2_5end | |||
|cluster_id=chr17:56084912..56084925,- | |||
|description=CAGE_peak_4_at_SRSF1_5end | |||
|id=chr17:56084912..56084925,- | |||
|ontology_enrichment_celltype=CL:0000066!4.89e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.25e-14;5!CL:0002321;5.58e-10;15!CL:0002253;1.05e-09;2!CL:0000540;1.37e-07;6!CL:0000404;1.37e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.22e-14,5;CL:0002253,1.10e-09,2;CL:0000540,1.36e-07,6;CL:0000031,1.36e-07,6;CL:0000404,1.36e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;1.37e-07;6!UBERON:0009117;4.91e-07;10!UBERON:0005564;4.91e-07;10 | |||
|ontology_enrichment_disease=DOID:162!6.62e-40!235;DOID:14566!8.16e-39!239;DOID:0050687!8.55e-28!143;DOID:305!1.62e-24!106;DOID:0050686!1.43e-15!137;DOID:2531!7.97e-12!51;DOID:0060083!7.97e-12!51;DOID:1240!9.10e-09!39;DOID:3095!1.55e-07!22;DOID:2994!1.55e-07!22;DOID:7!5.03e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.19e-11;22!DOID:2994;4.19e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.97e-12,235;DOID:14566,7.57e-12,239;DOID:305,2.07e-11,106;DOID:3095,3.87e-11,22;DOID:2994,3.87e-11,22;DOID:0050687,2.11e-10,143;DOID:0050686,8.92e-08,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0.684372125364421,0.502170558379211,0.152826811495903,0.328402357799783,0.236132343941038,0,0,0,0.919421224478927,0.30120591877825,0,0.697204805222715,0.853015394924529,0.587200878669695,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0.366403487860815,0,0,0,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0,2.1349799145941,0,0,0,0,0.151357427644931,0,0.468642863667593,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0,0,0.600182192168805,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.386521706326594,0,0,2.31750041646231,3.5783037446801,3.137236457477,1.45125477021519,0.756962552626885,3.28479623168247,0,0,0,0,0,0.473227200159376,0.674338760312407,0.241011029883482,0.661763836394364,0.871517776369625,0.237270619111097,0.539325232640658,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0.737930631258681,0.343135620597051,0.109750285408626,0,0.402115889646523,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,1.56919201590938,0,0,0.128343036279748,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.35142424497814,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0.308419387605311,0,0.328508624055237,0,0.232420756919918,1.20859449591622,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0.254876273045038,0,0.671624264166535,0.438519753291869,0.522870902049801,0.256450125116389,0,0.325378394664303,0,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0,0.307007349452259,0.551346289938122,0,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0.211107635297664,0,0.75894634753143,1.04980416073495,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0.371606350251437,0.865615277858669,0.497992903438899,0.318852545457645,0,0,0,0,0,0.684704037099577,0.156679895773023,5.01268954180134,0,0.1605880751037,0,1.27753871307098,1.03051603426729,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0.278406173895242,1.23087398947712,0.540911356951966,0.99921590399346,0,0.561421621224659,0,0.121360521749513,0.557216921387392,0.852408440419239,0,0.593929361665277,0,0,0,0.667852230137435,0.988823245360557,4.43363357068786,0,0,0.251932747854276,0.306806047506464,0.492339221844278,0,1.16828856491525,0.716084698702437,0,0,0,0,0,0,0,1.04171104434093,0.524759999977174,0,0.1137934482855,0.762760950878299,0.236387681767936,0,0.583209226766509,0.520874984799877,0,0,0,0.110579259931225,0,0,0.653630781113941,0.557694977114413,0,0,0,0.987334088507493,0.651884231532048,0,0,0,1.02193298195737,0,0.166211681900156,0.676786981851542,0.392125068635479,0.503464760927528,1.3282761290693,0.794682894901893,0.421996129056054,0.652931232636591,1.27217764290547,2.59666367690509,0.995261931078505,0,0.611030144933625,0.889563386041866,0.370691816839509,0.522109747527277,0.067401132980677,0.802577647298789,0,0.364909578431332,0.391329237864179,0.242780379534093,0,0,0,0,9.16972858428404,1.7626992537532,0,0.330991955875499,0.313932918407225,0,0,0,0,0,1.56706571844725,0,0,0.677294319023596,0.730893170861856,0.821154570532092,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0.596143835108969,0,0.977756913674015,0.240476460754601,0,0,0,0.458146384663663,0.514784993585894,1.4405479798815,0.372757606696298,0.235694034616795,0,0.209205692624666,1.32597682927218,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0.393915911536118,0.824158583811665,0.674035438541849,0.492137407573744,0.677386656526276,0,0,3.3758161177654,5.08895915409765,5.40072439437941,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0.575745591958336,0,0,0.25426853765475,0.542999601753713,0,0,0,0.656740165994712,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.730755590285376,0.638341257770182,0,0.2506898940227,0,0,0.628216385000937,0,0,0.1251909307065,0,0,0,3.73541314327823,0.249960815924213,0.4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| |||
|short_description=p4@SRSF1 | |||
}} |
Latest revision as of 10:00, 16 September 2015
Short description: | p4@SRSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SRSF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -205bp_to_ENST00000258962, NM_001078166, NM_006924, NR_034041, uc002ivi.2, uc002ivj.2_5end |
EntrezGene: | SRSF1 |
HGNC: | 10780 |
UniProt: | Q07955Q59FA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.22e-14 | 5 |
epithelial cell of large intestine | 1.10e-09 | 2 |
neuron | 1.36e-07 | 6 |
neuroblast | 1.36e-07 | 6 |
electrically signaling cell | 1.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.97e-12 | 235 |
disease of cellular proliferation | 7.57e-12 | 239 |
carcinoma | 2.07e-11 | 106 |
germ cell and embryonal cancer | 3.87e-11 | 22 |
germ cell cancer | 3.87e-11 | 22 |
cell type cancer | 2.11e-10 | 143 |
organ system cancer | 8.92e-08 | 137 |