FFCP PHASE1:Hg19::chr7:132937820..132937860,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60412 | |EntrezGene=60412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30389 | |HGNC=30389 | ||
|TSSclassifier=strong | |||
|UniProt=Q96A65,E9PED2,F5H222,Q6NX51,Q8TAR2 | |UniProt=Q96A65,E9PED2,F5H222,Q6NX51,Q8TAR2 | ||
|association_with_transcript=0bp_to_ENST00000253861,ENST00000393161,ENST00000462055,ENST00000481074,ENST00000486013,ENST00000546185,NM_001037126,NM_021807,uc003vri.2,uc003vrj.2,uc003vrk.2_5end | |association_with_transcript=0bp_to_ENST00000253861,ENST00000393161,ENST00000462055,ENST00000481074,ENST00000486013,ENST00000546185,NM_001037126,NM_021807,uc003vri.2,uc003vrj.2,uc003vrk.2_5end | ||
|cluster_id=chr7:132937820..132937860,+ | |||
|description=CAGE_peak_1_at_EXOC4_5end | |description=CAGE_peak_1_at_EXOC4_5end | ||
|id=chr7:132937820..132937860,+ | |id=chr7:132937820..132937860,+ | ||
Latest revision as of 10:40, 16 September 2015
| Short description: | p1@EXOC4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_EXOC4_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000253861, ENST00000393161, ENST00000462055, ENST00000481074, ENST00000486013, ENST00000546185, NM_001037126, NM_021807, uc003vri.2, uc003vrj.2, uc003vrk.2_5end |
| EntrezGene: | EXOC4 |
| HGNC: | 30389 |
| UniProt: | Q96A65E9PED2F5H222Q6NX51Q8TAR2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@EXOC4 |
|---|
0
50
100
150
200
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.03e-16 | 114 |
| neural tube | 1.69e-13 | 56 |
| neural rod | 1.69e-13 | 56 |
| future spinal cord | 1.69e-13 | 56 |
| neural keel | 1.69e-13 | 56 |
| regional part of forebrain | 5.63e-13 | 41 |
| forebrain | 5.63e-13 | 41 |
| anterior neural tube | 5.63e-13 | 41 |
| future forebrain | 5.63e-13 | 41 |
| regional part of nervous system | 9.90e-13 | 53 |
Showing 1 to 10 of 28 entries
