FFCP PHASE1:Hg19::chr2:113875512..113875560,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:113875512..113875560,+ to FFCP PHASE1:Hg19::chr2:113875512..113875560,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3557 | |EntrezGene=3557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6000 | |HGNC=6000 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000486167_5end | |||
|cluster_id=chr2:113875512..113875560,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_2_at_IL1RN_5end | |||
|id=chr2:113875512..113875560,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.65e-14!43;CL:0000223!4.22e-09!59;CL:0000066!1.39e-08!254;CL:0002368!1.66e-08!13;CL:0002251!7.64e-08!21;CL:0002159!1.49e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.95e-12;13!CL:0002076;4.26e-11;42!CL:0002159;7.22e-10;14!CL:0000235;7.46e-08;6!CL:0000622;7.67e-08;5!CL:0002202;2.17e-07;9!CL:0002632;2.17e-07;9!CL:0000990;3.42e-07;8!CL:0000840;6.80e-07;5!CL:0000244;7.45e-07;4!CL:0000731;7.45e-07;4!CL:0002251;8.03e-07;20!CL:0000473;8.33e-07;39!CL:0000234;8.33e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.97e-14,42;CL:0002368,5.24e-12,13;CL:0002159,7.30e-10,14;CL:0000223,1.07e-09,58;CL:0000557,4.07e-09,67;CL:0000066,3.85e-08,253;CL:0000622,7.80e-08,5;CL:0000235,8.73e-08,6;CL:0000839,1.42e-07,66;CL:0002202,1.93e-07,9;CL:0002632,1.93e-07,9;CL:0000990,2.93e-07,8;CL:0000840,6.85e-07,5;CL:0001029,6.85e-07,5;CL:0002009,7.12e-07,61;CL:0000244,7.46e-07,4;CL:0000731,7.46e-07,4;CL:0002251,7.91e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.56e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.53e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.38e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.89e-09!169;UBERON:0000925!1.89e-09!169;UBERON:0006595!1.89e-09!169;UBERON:0000161!4.25e-08!35;UBERON:0000062!8.70e-08!511;UBERON:0000166!9.83e-08!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.96e-08;7!UBERON:0001173;1.96e-08;7!UBERON:0000365;7.73e-08;5!UBERON:0000486;2.06e-07;12!UBERON:0000165;2.87e-07;28!UBERON:0000161;3.44e-07;19!UBERON:0000166;3.44e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.36e-12,160;UBERON:0000925,2.36e-12,160;UBERON:0006595,2.36e-12,160;UBERON:0000161,1.29e-10,36;UBERON:0000166,8.84e-09,22;UBERON:0001004,2.48e-08,74;UBERON:0001007,4.56e-08,145;UBERON:0001555,4.56e-08,145;UBERON:0007026,4.56e-08,145;UBERON:0000365,7.69e-08,5;UBERON:0003102,2.19e-07,99;UBERON:0002050,2.36e-07,564;UBERON:0002371,3.73e-07,76;UBERON:0000922,3.93e-07,592;UBERON:0005423,5.09e-07,581;UBERON:0004765,6.14e-07,90;UBERON:0000165,6.80e-07,29;UBERON:0000930,6.80e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,1.72013755551056,4.18680700783456,3.05817920982241,1.84636884759917,0,0,4.03395087871065,0,0.730310090387373,0,1.10808952269109,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0.464448369948228,64.3594857135249,66.8677139687715,80.9761282265265,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.822335776043652,1.54853185447552,1.1507695692886,0,0,21.0294865249337,18.0735711403471,23.0225027210381,0,0.272906150057846,0.449446968890169,15.9163624032869,18.6138835704134,31.327519164153,0,0,0,1.45104619314292,5.10646702222026,9.9651559839292,0,0,0,12.7133895553007,6.99727508376373,12.3420331101945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.982343066232845,157.011269254086,279.57146985946,162.922791614651,182.313834952333,128.038515979667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,161.354799292738,0,0.12663051166458,0.264818361626438,0.286836620748814,1.41867352879343,0,0,0,0,0,0,0.756787138224657,0.576175924479999,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0.309977343527296,0,0,0,0,0.505008341862199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,245.827805223714,291.020110670421,269.022710474886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,78.9104552088018,53.9528415636574,67.0528245985578,44.9979843470454,0,0,0,0,0,0,0,0,0,0.858486162094873,5.17055712783534,237.748333381465,89.7732220223919,108.731247424661,225.264033914671,275.04368865023,0.716468181622786,5.52204483176528,6.13412286664338,80.3041077770388,1.67292024625129,5.1832028885193,1.15295962733569,1.13618190083742,0.888970520090367,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.51128545716063,40.058448501776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,3.33440328590885,0,4.5358543999452,0,0,0,0,0,0,0,0,0.887808626565635,0.164254312027618,0,0,0,8.22076528243468,350.368162901085,0,0,0,11.2799903226853,2.46449078734127,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,66.0405368695598,135.212531175596,0,0,0,0,0,0,0,0.511359764496605,0,118.674569229182,32.4801213847029,19.014294161693,45.7233169467086,0,0,1.3940745403212,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,1.94970791705028,0,0,0,0,0,1.32687795048244,1.31535265576129,0,0,0,2.78841148289775,0,0,0,0,0,0.844430541190656,0,0,0,84.4830149729996,128.698036902871,77.312599251539,0.188287601553558,74.0469240994515,90.9745968605178,190.674966020771,66.8495094602252,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,2.79411120005943,0,4.65681881992542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,10.2927297224521,0.73254089635947,0,0.111443384277478,0,37.2441396190796,4.75143489332222,34.0948379330148,0,0,0.779160935160341,0,0.211125408127993,0.996239941255349,1.65770349318689,0,0,0,0,20.8494574661798,7.69791051105119,0,4.24166644238815,0,0,0,0,0,2.60427761085233,0.0874599999961957,0.724999575434793,2.84483620713749,0,0,0,0,0,0,0,0,0,0,0,0,106.240893140296,99.9583857964324,2.16489906109302,0,0,0,3.82801391678303,0.0915975934018623,0.533034776018635,0,1.41282230755522,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,1.99052386215701,13.1801771109975,0,0,0,0,0.067401132980677,0,0,0,1.9566461893209,0,2.36750641709634,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0,100.05023776008,12.6235849541584,0.34945333648406,0,0.0967563312890851,0,0,1066.39423629017,0,31.411322968494,0,0,0,12.5152884950274,13.4666818022577,10.4591967422283,0,0.72045208577053,0,0,0.14405479798815,0,50.674217442611,0,0,0,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,2.62015542698232,0,0,0,0,0,0,0,0,0,0,0,0,391.004623516508,38.6900977278975,0,17.1071690675626,0.394028536495991,0.681909645754975,0,0,0.383830394638891,0,0,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,0,0,0,5.63852017853338,0.533937062838473,0,0,0,0,0,23.6186265374967,0,0.2506898940227,0.919036730290385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17913448083247,0.233713309847224,0,0,0,0,0.686520205190771,0,0.932623203496683,49.9750406964963,0,0.449803112163605,0.310525913752519,0,0,0,0.150257608997218,0,0,0.545545977607678,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0,0.584580926518165,1.86010776438708,1.63565394255844,0,0,0.422624246717254,0,0,0,0,8.83708561208836,136.522399534178,110.729752285869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79071539156051,4.48284948721413,15.0411450787777,0.231051332300676,0,0,0,0.0752103283492573,0.60511520611056,0,0,0,4.5835386727284,0,0,0,0,0,0,3.47347824872506,0,0.127762427639595,0,0,0,0,0.620916591138472,0,0,0,0.0657727735628491,0,1.4460082245969,4.86657175673187,0,0,0,0,0,0.2859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| ||
|short_description=p2@IL1RN | |||
}} | }} |
Latest revision as of 12:03, 16 September 2015
Short description: | p2@IL1RN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL1RN_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000486167_5end |
EntrezGene: | IL1RN |
HGNC: | 6000 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.97e-14 | 42 |
respiratory epithelial cell | 5.24e-12 | 13 |
general ecto-epithelial cell | 7.30e-10 | 14 |
endodermal cell | 1.07e-09 | 58 |
granulocyte monocyte progenitor cell | 4.07e-09 | 67 |
epithelial cell | 3.85e-08 | 253 |
acinar cell | 7.80e-08 | 5 |
macrophage | 8.73e-08 | 6 |
myeloid lineage restricted progenitor cell | 1.42e-07 | 66 |
epithelial cell of tracheobronchial tree | 1.93e-07 | 9 |
epithelial cell of lower respiratory tract | 1.93e-07 | 9 |
conventional dendritic cell | 2.93e-07 | 8 |
immature conventional dendritic cell | 6.85e-07 | 5 |
common dendritic progenitor | 6.85e-07 | 5 |
macrophage dendritic cell progenitor | 7.12e-07 | 61 |
transitional epithelial cell | 7.46e-07 | 4 |
urothelial cell | 7.46e-07 | 4 |
epithelial cell of alimentary canal | 7.91e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.36e-12 | 160 |
endoderm | 2.36e-12 | 160 |
presumptive endoderm | 2.36e-12 | 160 |
orifice | 1.29e-10 | 36 |
oral opening | 8.84e-09 | 22 |
respiratory system | 2.48e-08 | 74 |
digestive system | 4.56e-08 | 145 |
digestive tract | 4.56e-08 | 145 |
primitive gut | 4.56e-08 | 145 |
urothelium | 7.69e-08 | 5 |
surface structure | 2.19e-07 | 99 |
embryonic structure | 2.36e-07 | 564 |
bone marrow | 3.73e-07 | 76 |
embryo | 3.93e-07 | 592 |
developing anatomical structure | 5.09e-07 | 581 |
skeletal element | 6.14e-07 | 90 |
mouth | 6.80e-07 | 29 |
stomodeum | 6.80e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.38e-07 | 14 |