FFCP PHASE1:Hg19::chr6:159084018..159084033,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94120 | |EntrezGene=94120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15587 | |HGNC=15587 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7H4 | |UniProt=F8W7H4 | ||
|association_with_transcript=-161bp_to_ENST00000367081_5end | |association_with_transcript=-161bp_to_ENST00000367081_5end | ||
|cluster_id=chr6:159084018..159084033,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_6_at_SYTL3_5end | |description=CAGE_peak_6_at_SYTL3_5end | ||
|id=chr6:159084018..159084033,+ | |id=chr6:159084018..159084033,+ | ||
|ontology_enrichment_celltype=CL:0002274!3.85e-18!5;CL:0000457!3.85e-18!5;CL:0002191!3.85e-18!5;CL:0000097!3.85e-18!5;CL:0000831!3.85e-18!5;CL:0002028!3.85e-18!5;CL:0000767!5.74e-11!3;CL:0000842!6.34e-11!3;CL:0000163!7.02e-10!9;CL:0000224!2.77e-08!4;CL:0000764!1.56e-07!2;CL:0000765!1.56e-07!2;CL:0000050!1.56e-07!2;CL:0000038!1.56e-07!2;CL:0000558!1.56e-07!2;CL:0000547!1.56e-07!2;CL:0000549!1.56e-07!2;CL:0000550!1.56e-07!2;CL:0000552!1.56e-07!2;CL:0000094!4.94e-07!8 | |ontology_enrichment_celltype=CL:0002274!3.85e-18!5;CL:0000457!3.85e-18!5;CL:0002191!3.85e-18!5;CL:0000097!3.85e-18!5;CL:0000831!3.85e-18!5;CL:0002028!3.85e-18!5;CL:0000767!5.74e-11!3;CL:0000842!6.34e-11!3;CL:0000163!7.02e-10!9;CL:0000224!2.77e-08!4;CL:0000764!1.56e-07!2;CL:0000765!1.56e-07!2;CL:0000050!1.56e-07!2;CL:0000038!1.56e-07!2;CL:0000558!1.56e-07!2;CL:0000547!1.56e-07!2;CL:0000549!1.56e-07!2;CL:0000550!1.56e-07!2;CL:0000552!1.56e-07!2;CL:0000094!4.94e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.62e-77;5!CL:0000163;5.86e-43;9!CL:0002032;2.43e-16;1!CL:0000557;2.43e-16;1!CL:0000151;5.20e-10;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.62e-77,5;CL:0002028,4.62e-77,5;CL:0000163,5.86e-43,9;CL:0000151,8.13e-11,36;CL:0000557,6.17e-08,67;CL:0000766,2.06e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.24e-21!15;UBERON:0000179!3.24e-21!15;UBERON:0000463!3.24e-21!15;UBERON:0007023!3.73e-17!115;UBERON:0002390!4.58e-10!102;UBERON:0003061!4.58e-10!102;UBERON:0002193!1.05e-08!112 | |ontology_enrichment_uberon=UBERON:0000178!3.24e-21!15;UBERON:0000179!3.24e-21!15;UBERON:0000463!3.24e-21!15;UBERON:0007023!3.73e-17!115;UBERON:0002390!4.58e-10!102;UBERON:0003061!4.58e-10!102;UBERON:0002193!1.05e-08!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.01e-36;15!UBERON:0000179;7.01e-36;15!UBERON:0000463;7.01e-36;15!UBERON:0002390;2.87e-22;32!UBERON:0002193;2.10e-13;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.80e-36,15;UBERON:0000179,6.80e-36,15;UBERON:0000463,6.80e-36,15;UBERON:0002390,4.00e-21,98;UBERON:0003061,4.00e-21,98;UBERON:0002193,4.28e-19,108;UBERON:0003081,1.10e-09,203;UBERON:0002371,5.68e-07,76 | |||
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| ||
|short_description=p6@SYTL3 | |short_description=p6@SYTL3 | ||
}} | }} |
Latest revision as of 12:10, 16 September 2015
Short description: | p6@SYTL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SYTL3_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -161bp_to_ENST00000367081_5end |
EntrezGene: | SYTL3 |
HGNC: | 15587 |
UniProt: | F8W7H4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.62e-77 | 5 |
basophil mast progenitor cell | 4.62e-77 | 5 |
endocrine cell | 5.86e-43 | 9 |
secretory cell | 8.13e-11 | 36 |
granulocyte monocyte progenitor cell | 6.17e-08 | 67 |
myeloid leukocyte | 2.06e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 6.80e-36 | 15 |
haemolymphatic fluid | 6.80e-36 | 15 |
organism substance | 6.80e-36 | 15 |
hematopoietic system | 4.00e-21 | 98 |
blood island | 4.00e-21 | 98 |
hemolymphoid system | 4.28e-19 | 108 |
lateral plate mesoderm | 1.10e-09 | 203 |
bone marrow | 5.68e-07 | 76 |