FFCP PHASE1:Hg19::chr16:31439694..31439715,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1339 | |EntrezGene=1339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2279 | |HGNC=2279 | ||
|TSSclassifier=strong | |||
|UniProt=Q02221 | |UniProt=Q02221 | ||
|association_with_transcript=5bp_to_uc002ebx.1_5end | |association_with_transcript=5bp_to_uc002ebx.1_5end | ||
|cluster_id=chr16:31439694..31439715,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_2_at_COX6A2_5end | |description=CAGE_peak_2_at_COX6A2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!2.84e-10!9 | |ontology_enrichment_celltype=CL:0000188!2.84e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;7.74e-13;9 | |ontology_enrichment_celltype_v019=CL:0000188;7.74e-13;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,7.41e-13,9 | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.20e-09;4!UBERON:0007284;5.20e-09;4!UBERON:0006965;9.76e-08;2 | |ontology_enrichment_development_v019=UBERON:0005062;5.20e-09;4!UBERON:0007284;5.20e-09;4!UBERON:0006965;9.76e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;7.66e-09;2 | |ontology_enrichment_disease_v019=DOID:114;7.66e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,7.66e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.82e-52!115;UBERON:0001049!6.42e-14!57;UBERON:0005068!6.42e-14!57;UBERON:0006241!6.42e-14!57;UBERON:0007135!6.42e-14!57;UBERON:0003075!2.62e-13!86;UBERON:0007284!2.62e-13!86;UBERON:0002616!4.48e-13!59;UBERON:0002346!2.89e-12!90;UBERON:0002780!4.33e-12!41;UBERON:0001890!4.33e-12!41;UBERON:0006240!4.33e-12!41;UBERON:0000483!5.19e-12!309;UBERON:0000481!7.84e-12!347;UBERON:0000119!1.08e-11!312;UBERON:0003080!1.16e-11!42;UBERON:0000955!1.38e-11!69;UBERON:0006238!1.38e-11!69;UBERON:0005743!6.31e-11!86;UBERON:0001017!6.41e-11!82;UBERON:0000922!2.39e-10!612;UBERON:0000468!2.51e-10!659;UBERON:0000153!2.08e-09!129;UBERON:0007811!2.08e-09!129;UBERON:0000073!4.66e-09!94;UBERON:0001016!4.66e-09!94;UBERON:0000475!8.96e-09!365;UBERON:0004121!2.75e-08!169;UBERON:0000923!2.78e-08!604;UBERON:0005291!2.78e-08!604;UBERON:0006598!2.78e-08!604;UBERON:0002532!2.78e-08!604;UBERON:0002050!3.21e-08!605;UBERON:0005423!3.21e-08!605;UBERON:0000924!7.95e-08!173;UBERON:0006601!7.95e-08!173;UBERON:0001893!8.45e-08!34;UBERON:0000033!9.98e-08!123;UBERON:0000467!1.08e-07!625;UBERON:0000480!1.24e-07!626;UBERON:0002368!3.56e-07!35;UBERON:0002791!3.62e-07!33;UBERON:0003056!4.02e-07!61;UBERON:0001894!5.36e-07!7;UBERON:0006222!5.36e-07!7;UBERON:0002020!6.59e-07!34;UBERON:0003528!6.59e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!8.82e-52!115;UBERON:0001049!6.42e-14!57;UBERON:0005068!6.42e-14!57;UBERON:0006241!6.42e-14!57;UBERON:0007135!6.42e-14!57;UBERON:0003075!2.62e-13!86;UBERON:0007284!2.62e-13!86;UBERON:0002616!4.48e-13!59;UBERON:0002346!2.89e-12!90;UBERON:0002780!4.33e-12!41;UBERON:0001890!4.33e-12!41;UBERON:0006240!4.33e-12!41;UBERON:0000483!5.19e-12!309;UBERON:0000481!7.84e-12!347;UBERON:0000119!1.08e-11!312;UBERON:0003080!1.16e-11!42;UBERON:0000955!1.38e-11!69;UBERON:0006238!1.38e-11!69;UBERON:0005743!6.31e-11!86;UBERON:0001017!6.41e-11!82;UBERON:0000922!2.39e-10!612;UBERON:0000468!2.51e-10!659;UBERON:0000153!2.08e-09!129;UBERON:0007811!2.08e-09!129;UBERON:0000073!4.66e-09!94;UBERON:0001016!4.66e-09!94;UBERON:0000475!8.96e-09!365;UBERON:0004121!2.75e-08!169;UBERON:0000923!2.78e-08!604;UBERON:0005291!2.78e-08!604;UBERON:0006598!2.78e-08!604;UBERON:0002532!2.78e-08!604;UBERON:0002050!3.21e-08!605;UBERON:0005423!3.21e-08!605;UBERON:0000924!7.95e-08!173;UBERON:0006601!7.95e-08!173;UBERON:0001893!8.45e-08!34;UBERON:0000033!9.98e-08!123;UBERON:0000467!1.08e-07!625;UBERON:0000480!1.24e-07!626;UBERON:0002368!3.56e-07!35;UBERON:0002791!3.62e-07!33;UBERON:0003056!4.02e-07!61;UBERON:0001894!5.36e-07!7;UBERON:0006222!5.36e-07!7;UBERON:0002020!6.59e-07!34;UBERON:0003528!6.59e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.08e-24;16!UBERON:0002036;2.08e-24;16!UBERON:0004151;3.61e-12;3!UBERON:0003978;6.97e-12;3!UBERON:0000946;6.97e-12;3!UBERON:0002385;1.71e-11;31!UBERON:0001015;1.71e-11;31!UBERON:0000383;1.71e-11;31!UBERON:0007100;1.06e-10;25!UBERON:0005090;6.59e-09;2!UBERON:0001630;6.59e-09;2!UBERON:0002081;1.39e-08;2!UBERON:0000341;1.67e-08;2!UBERON:0002133;2.00e-08;2!UBERON:0003127;3.70e-08;2!UBERON:0001829;6.76e-08;2!UBERON:0001905;1.55e-07;2!UBERON:0002757;1.55e-07;2!UBERON:0010134;1.55e-07;2!UBERON:0005408;1.55e-07;2!UBERON:0001899;1.55e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001134;2.08e-24;16!UBERON:0002036;2.08e-24;16!UBERON:0004151;3.61e-12;3!UBERON:0003978;6.97e-12;3!UBERON:0000946;6.97e-12;3!UBERON:0002385;1.71e-11;31!UBERON:0001015;1.71e-11;31!UBERON:0000383;1.71e-11;31!UBERON:0007100;1.06e-10;25!UBERON:0005090;6.59e-09;2!UBERON:0001630;6.59e-09;2!UBERON:0002081;1.39e-08;2!UBERON:0000341;1.67e-08;2!UBERON:0002133;2.00e-08;2!UBERON:0003127;3.70e-08;2!UBERON:0001829;6.76e-08;2!UBERON:0001905;1.55e-07;2!UBERON:0002757;1.55e-07;2!UBERON:0010134;1.55e-07;2!UBERON:0005408;1.55e-07;2!UBERON:0001899;1.55e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.68e-19,114;UBERON:0004151,3.61e-12,3;UBERON:0003978,6.97e-12,3;UBERON:0009751,6.97e-12,3;UBERON:0000946,6.97e-12,3;UBERON:0002523,6.97e-12,3;UBERON:0005983,6.97e-12,3;UBERON:0002165,6.97e-12,3;UBERON:0002062,6.97e-12,3;UBERON:0007280,6.97e-12,3;UBERON:0007100,8.93e-10,27;UBERON:0005090,6.59e-09,2;UBERON:0001630,6.59e-09,2;UBERON:0003103,9.09e-09,68;UBERON:0002081,1.39e-08,2;UBERON:0010227,1.39e-08,2;UBERON:0000341,1.67e-08,2;UBERON:0002133,2.00e-08,2;UBERON:0003127,3.84e-08,2;UBERON:0001829,6.53e-08,2;UBERON:0001905,1.61e-07,2;UBERON:0002757,1.61e-07,2;UBERON:0010134,1.61e-07,2;UBERON:0005408,1.61e-07,2;UBERON:0001899,1.61e-07,2 | |||
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|short_description=p2@COX6A2 | |short_description=p2@COX6A2 | ||
}} | }} |
Latest revision as of 12:32, 16 September 2015
Short description: | p2@COX6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COX6A2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 5bp_to_uc002ebx.1_5end |
EntrezGene: | COX6A2 |
HGNC: | 2279 |
UniProt: | Q02221 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 7.41e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.68e-19 | 114 |
cardiac chamber | 3.61e-12 | 3 |
valve | 6.97e-12 | 3 |
cardiac mesenchyme | 6.97e-12 | 3 |
cardial valve | 6.97e-12 | 3 |
tunica intima | 6.97e-12 | 3 |
heart layer | 6.97e-12 | 3 |
endocardium | 6.97e-12 | 3 |
endocardial cushion | 6.97e-12 | 3 |
presumptive endocardium | 6.97e-12 | 3 |
primary circulatory organ | 8.93e-10 | 27 |
muscle structure | 6.59e-09 | 2 |
muscle organ | 6.59e-09 | 2 |
compound organ | 9.09e-09 | 68 |
cardiac atrium | 1.39e-08 | 2 |
future cardiac atrium | 1.39e-08 | 2 |
throat | 1.67e-08 | 2 |
atrioventricular valve | 2.00e-08 | 2 |
open tracheal system trachea | 3.84e-08 | 2 |
major salivary gland | 6.53e-08 | 2 |
pineal body | 1.61e-07 | 2 |
regional part of epithalamus | 1.61e-07 | 2 |
secretory circumventricular organ | 1.61e-07 | 2 |
circumventricular organ | 1.61e-07 | 2 |
epithalamus | 1.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.66e-09 | 2 |