FFCP PHASE1:Hg19::chr19:17905938..17905980,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10331 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13528 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2A9 | |||
|association_with_transcript=19bp_to_ENST00000318683,NM_014256,uc002nhl.1,uc010ebd.1,uc010ebe.1_5end | |||
|cluster_id=chr19:17905938..17905980,+ | |||
|description=CAGE_peak_1_at_B3GNT3_5end | |||
|id=chr19:17905938..17905980,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.48e-30!254;CL:0000223!3.32e-18!59;CL:0002076!1.56e-16!43;CL:0002251!1.03e-08!21;CL:0002368!6.93e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.28e-16;42!CL:0002251;5.63e-11;20!CL:0002368;8.48e-10;13!CL:1000507;4.87e-07;10!CL:1000494;4.87e-07;10!CL:0002202;4.88e-07;9!CL:0002632;4.88e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.05e-35,253;CL:0000223,1.08e-21,58;CL:0002076,1.31e-21,42;CL:0002251,5.28e-11,20;CL:0002368,8.34e-10,13;CL:1000507,4.83e-07,10;CL:1000494,4.83e-07,10;CL:0002202,4.90e-07,9;CL:0002632,4.90e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;7.34e-12;58!UBERON:0006595;3.09e-09;86 | |||
|ontology_enrichment_disease=DOID:305!5.13e-28!106;DOID:0050687!4.59e-19!143;DOID:299!4.72e-11!25;DOID:1749!1.82e-08!14;DOID:162!6.97e-08!235;DOID:14566!3.56e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:299;3.74e-12;25!DOID:1749;1.80e-09;14!DOID:305;1.35e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.18e-25,106;DOID:0050687,9.05e-17,143;DOID:299,3.49e-12,25;DOID:1749,1.83e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.69e-33!169;UBERON:0000925!5.69e-33!169;UBERON:0006595!5.69e-33!169;UBERON:0001007!2.50e-27!155;UBERON:0001555!2.50e-27!155;UBERON:0007026!2.50e-27!155;UBERON:0004921!5.24e-27!129;UBERON:0004185!5.24e-27!129;UBERON:0000077!2.53e-24!130;UBERON:0001041!7.73e-20!98;UBERON:0000466!1.21e-17!126;UBERON:0001004!8.31e-16!72;UBERON:0000464!1.79e-15!104;UBERON:0005911!8.47e-14!82;UBERON:0005177!4.81e-13!107;UBERON:0000065!1.21e-12!53;UBERON:0008947!7.71e-11!38;UBERON:0003258!7.71e-11!38;UBERON:0000072!7.40e-10!46;UBERON:0005409!3.70e-09!35;UBERON:0005153!5.27e-09!37;UBERON:0002553!7.19e-09!70;UBERON:0003104!7.85e-09!238;UBERON:0009142!7.85e-09!238;UBERON:0000161!1.32e-08!35;UBERON:0009569!2.38e-08!113;UBERON:0001048!2.57e-08!168;UBERON:0001008!4.13e-08!45;UBERON:0005178!8.68e-08!34;UBERON:0002224!8.68e-08!34;UBERON:0006554!8.93e-08!44;UBERON:0000160!1.59e-07!27;UBERON:0005181!2.47e-07!35;UBERON:0005157!6.47e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.00e-14;33!UBERON:0005409;8.19e-10;22!UBERON:0001041;8.47e-09;14!UBERON:0006554;3.92e-08;30!UBERON:0001008;3.92e-08;30!UBERON:0005911;5.22e-08;36!UBERON:0001555;5.35e-08;54!UBERON:0001004;5.94e-08;65!UBERON:0004807;6.21e-08;22!UBERON:0000065;1.55e-07;44!UBERON:0005178;1.65e-07;34!UBERON:0002224;1.65e-07;34!UBERON:0000160;2.54e-07;17!UBERON:0005181;3.31e-07;35!UBERON:0005631;4.26e-07;10!UBERON:0000158;4.26e-07;10!UBERON:0004211;4.87e-07;10!UBERON:0009773;4.87e-07;10!UBERON:0001231;4.87e-07;10!UBERON:0004810;4.87e-07;10!UBERON:0000072;5.63e-07;37!UBERON:0001007;5.82e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.84e-31,160;UBERON:0000925,2.84e-31,160;UBERON:0006595,2.84e-31,160;UBERON:0004921,1.37e-25,118;UBERON:0001007,1.59e-25,145;UBERON:0001555,1.59e-25,145;UBERON:0007026,1.59e-25,145;UBERON:0001041,1.73e-16,87;UBERON:0001004,5.60e-15,74;UBERON:0005177,6.20e-15,101;UBERON:0005911,4.02e-13,82;UBERON:0001008,4.73e-12,48;UBERON:0006554,1.32e-11,47;UBERON:0000065,2.40e-11,54;UBERON:0000161,8.13e-10,36;UBERON:0009569,1.27e-09,112;UBERON:0008947,2.03e-09,38;UBERON:0003258,2.03e-09,38;UBERON:0005153,3.19e-09,37;UBERON:0000072,7.63e-09,47;UBERON:0005178,2.11e-08,34;UBERON:0002224,2.11e-08,34;UBERON:0005631,2.59e-08,14;UBERON:0000158,2.59e-08,14;UBERON:0005409,4.53e-08,25;UBERON:0005181,5.55e-08,35;UBERON:0005157,1.71e-07,47;UBERON:0000160,2.65e-07,17;UBERON:0000166,3.78e-07,22;UBERON:0004810,4.83e-07,10 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,8.60068777755281,92.1097541723604,51.989046566981,33.2346392567852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39334510984468,30.3409004078046,38.2531516848378,34.0173689353445,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,9.6863920421339,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,1.37696839079683,0.393010762749165,0.616804496998528,0,0.32592226663359,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,1.03800594213442,0.802622484269139,1.04535523804977,0,0,0.34362744548263,1.01207876807801,0,0,0,0.451725357233318,0.511946444617674,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,5.50112117090393,48.4512733429081,35.2245220645208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.44905874525234,0.337834441449967,0,0,0,0,0,20.9325145028416,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.256735374395,27.5473581796743,33.2693330651244,1.82960559194393,1.32529768321485,1.74290914304278,1.86589899027667,2.01856680700503,2.91981887260664,0,0,0,0,0,1.41968160047813,2.02301628093722,0.723033089650446,0.882351781859152,0.871517776369625,1.89816495288877,2.29213223872279,1.37355025587742,2.69323009862473,0,0,0.4115740113314,0,0,4.91413608338813,2.36315962672562,0,53.1310054506251,0,8.34102169105554,24.7283857166763,18.798917840975,16.8510970188524,0,0,0,0,0,0,0,0,23.7061319387783,15.4527509177077,0,0,0,3.74935335947108,9.91094556373271,5.38745369521069,7.52291590703926,19.4724738804355,21.0860473540866,0,0,0.829312462163088,0,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.82707210449155,0,0.106727557803444,7.88131685760275,0,9.67648938654977,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,12.4485233079371,13.4339335103201,53.9594595164352,0,0,0,87.5327249040379,30.8061348417659,10.1965469992991,14.6139224653261,7.07195913582267,0,0,0,0,0,2.50844886927427,57.8569139812237,81.445448875015,9.62661445305367,0,0,1.02580050046556,0,0,24.2146377372147,0,0,6.3169209179579,12.3511446746939,0,0,0,0,0,0,0,0,0,14.3797876364051,17.4892961302247,13.7821729494151,29.1334408863984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2786515561207,58.3162979716135,30.4894757611703,23.5359501941948,39.6064942857532,43.8025836735826,107.753527309412,61.5658712554651,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,45.3324399564909,0,0,0,0,0,2.8725805519855,0,0,0,0,0,10.0253790836027,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,1.4098700508785,58.0135675265481,0.293016358543788,0,0.557216921387392,0,167.598628285858,51.0779251032138,256.479186252859,0,0,0,0,0,9.16540745954921,20.9975775803672,47.1114238487496,0,0,0,46.3720691920207,66.9539193286778,0,23.8717041641379,0,0,0,0,0,10.9379659655798,1.13697999995054,3.62499787717397,21.0517879328174,90.7685531545176,38.7675798099416,0,0,0,0,0,0,0,0,0,0,10.7356283094525,8.69537921092907,0,10.3753756974627,87.2444303662985,15.1019846971591,83.8973050094948,19.6018849879985,90.6159119231679,0,0.31396051279005,0.997270091400938,0.225595660617181,0,0,0,0.476809736941136,0.632994193584081,137.768490086321,3.1097675715467,0,107.488288556479,58.2935350077005,172.921531016216,0,0,0,0.202203398942031,0,0,0.182454789215666,51.0684655412754,0.242780379534093,26.4371549909092,79.8538725921182,0,0,0.450970258243478,0,16.6163468176796,0,0.941798755221676,8.36307008410712,19.9226682220855,0,111.598911749489,16.5607151630298,64.4238128694979,3.14508002835654,0,3.67674058898524,2.63121541510268,5.58385107961823,18.2339350998229,0,15.1407096322957,0.137041924646751,3.17943378724783,0.126621591911757,130.432772284114,27.2539988855215,169.268224828307,2.99714414373195,227.086497434871,0,0,18.294959344495,6.46113184940249,0.942776138467182,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.229160424011684,0,23.362443058382,0.429226048136571,0,0.201550417460179,0,2.32991899054908,8.6661500537946,7.49984311268615,8.22323235021056,0.78741985211799,0,0,0,0.643012593860077,1.92555211236127,0.83088067605837,0,0,0,0,25.2966320430426,14.3725571489895,14.0448447570811,0.717149357331379,42.0294282129585,1.42939065274673,0,0,0,0,0,0,0.492555124496034,0,4.07923529472452,4.9827759450548,17.2258955585888,0,0,18.6484653293919,257.257483145585,3.31040978959853,0.943225830597996,2.07119527673598,2.48083010905975,0,0,57.4507131993164,0,0,0,0,11.3078949300169,0,0,0,0,0,0.0620964029413835,0,1.74972571146949,0,0,2.35265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,1.07220795687463,0,0,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| |||
|short_description=p1@B3GNT3 | |||
}} |
Latest revision as of 12:57, 16 September 2015
Short description: | p1@B3GNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_B3GNT3_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000318683, NM_014256, uc002nhl.1, uc010ebd.1, uc010ebe.1_5end |
EntrezGene: | B3GNT3 |
HGNC: | 13528 |
UniProt: | Q9Y2A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.05e-35 | 253 |
endodermal cell | 1.08e-21 | 58 |
endo-epithelial cell | 1.31e-21 | 42 |
epithelial cell of alimentary canal | 5.28e-11 | 20 |
respiratory epithelial cell | 8.34e-10 | 13 |
kidney tubule cell | 4.83e-07 | 10 |
nephron tubule epithelial cell | 4.83e-07 | 10 |
epithelial cell of tracheobronchial tree | 4.90e-07 | 9 |
epithelial cell of lower respiratory tract | 4.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.84e-31 | 160 |
endoderm | 2.84e-31 | 160 |
presumptive endoderm | 2.84e-31 | 160 |
subdivision of digestive tract | 1.37e-25 | 118 |
digestive system | 1.59e-25 | 145 |
digestive tract | 1.59e-25 | 145 |
primitive gut | 1.59e-25 | 145 |
foregut | 1.73e-16 | 87 |
respiratory system | 5.60e-15 | 74 |
trunk region element | 6.20e-15 | 101 |
endo-epithelium | 4.02e-13 | 82 |
renal system | 4.73e-12 | 48 |
urinary system structure | 1.32e-11 | 47 |
respiratory tract | 2.40e-11 | 54 |
orifice | 8.13e-10 | 36 |
subdivision of trunk | 1.27e-09 | 112 |
respiratory primordium | 2.03e-09 | 38 |
endoderm of foregut | 2.03e-09 | 38 |
epithelial bud | 3.19e-09 | 37 |
segment of respiratory tract | 7.63e-09 | 47 |
thoracic cavity element | 2.11e-08 | 34 |
thoracic cavity | 2.11e-08 | 34 |
extraembryonic membrane | 2.59e-08 | 14 |
membranous layer | 2.59e-08 | 14 |
gastrointestinal system | 4.53e-08 | 25 |
thoracic segment organ | 5.55e-08 | 35 |
epithelial fold | 1.71e-07 | 47 |
intestine | 2.65e-07 | 17 |
oral opening | 3.78e-07 | 22 |
nephron tubule epithelium | 4.83e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.18e-25 | 106 |
cell type cancer | 9.05e-17 | 143 |
adenocarcinoma | 3.49e-12 | 25 |
squamous cell carcinoma | 1.83e-09 | 14 |