FFCP PHASE1:Hg19::chr5:156485016..156485034,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26762 | |EntrezGene=26762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17866 | |HGNC=17866 | ||
|TSSclassifier=strong | |||
|UniProt=Q96D42,E9PFX0 | |UniProt=Q96D42,E9PFX0 | ||
|association_with_transcript=452bp_to_ENST00000339252,ENST00000425854,NM_012206,uc003lwi.2_5end | |association_with_transcript=452bp_to_ENST00000339252,ENST00000425854,NM_012206,uc003lwi.2_5end | ||
|cluster_id=chr5:156485016..156485034,- | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_3_at_HAVCR1_5end | |description=CAGE_peak_3_at_HAVCR1_5end | ||
|id=chr5:156485016..156485034,- | |id=chr5:156485016..156485034,- | ||
|ontology_enrichment_celltype=CL:1000497!1.76e-26!18;CL:0002518!1.76e-26!18;CL:1000507!1.50e-22!12;CL:1000494!1.50e-22!12;CL:1000449!8.26e-17!16;CL:0000159!2.19e-16!2;CL:0000239!3.79e-11!3;CL:1000615!3.79e-11!3;CL:0002306!3.79e-11!3;CL:0000066!6.80e-11!254;CL:0002681!1.16e-09!13;CL:0002584!1.16e-09!13;CL:0000313!3.05e-09!1;CL:0000319!7.27e-09!1;CL:0002563!2.13e-08!4 | |ontology_enrichment_celltype=CL:1000497!1.76e-26!18;CL:0002518!1.76e-26!18;CL:1000507!1.50e-22!12;CL:1000494!1.50e-22!12;CL:1000449!8.26e-17!16;CL:0000159!2.19e-16!2;CL:0000239!3.79e-11!3;CL:1000615!3.79e-11!3;CL:0002306!3.79e-11!3;CL:0000066!6.80e-11!254;CL:0002681!1.16e-09!13;CL:0002584!1.16e-09!13;CL:0000313!3.05e-09!1;CL:0000319!7.27e-09!1;CL:0002563!2.13e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:1000497;9.07e-09;17!CL:0002518;9.07e-09;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,9.25e-09,17;CL:0002518,9.25e-09,17 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.36e-14;10!UBERON:0007687;3.36e-14;10 | |||
|ontology_enrichment_disease=DOID:4468!7.90e-17!2;DOID:299!3.02e-14!25;DOID:305!5.31e-10!106;DOID:2152!3.05e-09!1;DOID:3030!7.27e-09!1;DOID:5662!9.17e-09!1;DOID:0050687!4.37e-08!143 | |ontology_enrichment_disease=DOID:4468!7.90e-17!2;DOID:299!3.02e-14!25;DOID:305!5.31e-10!106;DOID:2152!3.05e-09!1;DOID:3030!7.27e-09!1;DOID:5662!9.17e-09!1;DOID:0050687!4.37e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.17e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.07e-17,2 | |||
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|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@HAVCR1 | |short_description=p3@HAVCR1 | ||
}} | }} |
Latest revision as of 13:10, 16 September 2015
Short description: | p3@HAVCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HAVCR1_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | 452bp_to_ENST00000339252, ENST00000425854, NM_012206, uc003lwi.2_5end |
EntrezGene: | HAVCR1 |
HGNC: | 17866 |
UniProt: | Q96D42E9PFX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 9.25e-09 | 17 |
kidney epithelial cell | 9.25e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.07e-17 | 2 |