FFCP PHASE1:Hg19::chr10:11653684..11653696,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9712 | |EntrezGene=9712 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16858 | |HGNC=16858 | ||
|TSSclassifier=strong | |||
|UniProt=Q92738 | |UniProt=Q92738 | ||
|association_with_transcript=-5bp_to_ENST00000535316,NM_014688,uc001ikt.3,uc001iku.3_5end | |association_with_transcript=-5bp_to_ENST00000535316,NM_014688,uc001ikt.3,uc001iku.3_5end | ||
|cluster_id=chr10:11653684..11653696,- | |||
|description=CAGE_peak_3_at_USP6NL_5end | |description=CAGE_peak_3_at_USP6NL_5end | ||
|id=chr10:11653684..11653696,- | |id=chr10:11653684..11653696,- | ||
|ontology_enrichment_celltype=CL:0000945!3.99e-12!24;CL:0000826!3.99e-12!24;CL:0000236!3.74e-10!14;CL:0000542!1.17e-09!53;CL:0000051!1.17e-09!53;CL:0000838!3.78e-09!52 | |ontology_enrichment_celltype=CL:0000945!3.99e-12!24;CL:0000826!3.99e-12!24;CL:0000236!3.74e-10!14;CL:0000542!1.17e-09!53;CL:0000051!1.17e-09!53;CL:0000838!3.78e-09!52 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.68e-35;13!CL:0000945;6.21e-33;24!CL:0000542;5.68e-18;53!CL:0002032;5.60e-07;1!CL:0000511;5.60e-07;1!CL:0002625;5.60e-07;1!CL:0000817;5.60e-07;1!CL:0000557;5.60e-07;1!CL:0000216;5.60e-07;1 | |ontology_enrichment_celltype_v019=CL:0000236;1.68e-35;13!CL:0000945;6.21e-33;24!CL:0000542;5.68e-18;53!CL:0002032;5.60e-07;1!CL:0000511;5.60e-07;1!CL:0002625;5.60e-07;1!CL:0000817;5.60e-07;1!CL:0000557;5.60e-07;1!CL:0000216;5.60e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.30e-33,24;CL:0000826,3.30e-33,24;CL:0000236,5.64e-33,14;CL:0000838,4.36e-22,52;CL:0000542,1.31e-21,53;CL:0000051,1.31e-21,53;CL:0002031,1.10e-11,120;CL:0000738,6.49e-10,136;CL:0002087,1.82e-09,115;CL:0000037,1.88e-09,168;CL:0002032,7.40e-09,161;CL:0000837,7.40e-09,161;CL:0000988,9.17e-09,177;CL:0000511,4.06e-07,1;CL:0002625,4.06e-07,1;CL:0000216,4.06e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;5.68e-18;53!UBERON:0000358;2.22e-07;1 | |ontology_enrichment_development_v019=CL:0000051;5.68e-18;53!UBERON:0000358;2.22e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.22e-09;10 | |ontology_enrichment_disease_v019=DOID:0060058;2.22e-09;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.29e-09,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.57e-07;8!UBERON:0000029;5.60e-07;1!UBERON:0001136;5.60e-07;1!UBERON:0001343;5.60e-07;1!UBERON:0004910;5.60e-07;1!UBERON:0004813;5.60e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000473;3.57e-07;8!UBERON:0000029;5.60e-07;1!UBERON:0001136;5.60e-07;1!UBERON:0001343;5.60e-07;1!UBERON:0004910;5.60e-07;1!UBERON:0004813;5.60e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.33e-07,8;UBERON:0001136,4.06e-07,1;UBERON:0001343,4.06e-07,1;UBERON:0004910,4.06e-07,1;UBERON:0005154,4.06e-07,1;UBERON:0005295,4.06e-07,1;UBERON:0004813,4.06e-07,1;UBERON:0005297,4.06e-07,1;UBERON:0005294,4.06e-07,1;UBERON:0010141,4.06e-07,1;UBERON:0005891,4.06e-07,1;UBERON:0000029,4.57e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0.376627918784408,0.382067028739756,0.410502947249729,0.157421562627358,0,0,0,0,0,0,1.85921281392724,2.27470771979874,0.880801318004542,0,0.401088894940283,0.217010870715852,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0.425208599930087,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0.182664153764634,1.75996244461323,3.82297027883492,0.889509253863555,1.70692089026603,0.800791974072025,3.4485146397269,2.64417949113945,0.954053754535364,2.84606484554724,4.69789751496751,2.29363936875137,0,0.560508562981536,0.526768169550154,0.590129310341499,0.393010762749165,0.411202997999018,0,1.30368906653436,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0,0,0.95569624297229,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.351339142772504,0.654895377488563,0,0,0.649094787309367,0,0,0,0.571994910780128,0,0,0,0,0,0,1.10047216776027,0,0,0,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.535798369704479,0.673588117878509,0.450445921933289,0,0,0.916008719652036,0,0,0,0.496971951695318,0.379891534993739,0,0,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.490385709340376,0.454072282934794,0.576175924479999,0,0.624320153660641,0,0,0.23486899728753,0,0.280901613404497,0,0.122834317311768,0,0,0.989067717114227,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0,0,0.302256294682921,0,0,0.545492241181669,0,0.975789649036763,0.397589304964456,0.232387885739037,0.414644220061482,0,1.09493207722749,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,1.7658523976586,0,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,1.44331342025273,0.231860809950154,0.234817388471643,0,0,0,0.790204397959275,0,0.246217006087397,0.234004265139238,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0.317489471460845,0,0,0,0.102827492703324,0,0.857479297891735,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0,0.254094624222463,0,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0.206768026122887,0,0.533637789017222,0,0,0,0.248107807818777,0,0,0,0,0,0,0.308419387605311,0.355123450626254,0,0,0.232420756919918,0,0.200506470303285,0.184161977871793,0.34444334449382,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.447749509444357,1.09629938322967,0.261435451024901,0,0.656029291399411,0,0.309123034943167,0.640986253728404,0.330037999682352,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.15350367472613,0.413509717453592,0.107420244868274,0.145016693914229,0.255679882248303,0.178064071293475,0,0.192190067365106,0.255225424989168,0.30347334256665,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0,0,0.427296284509893,0.962479855263359,0.245040215981032,0.929015875628594,1.00988449083511,1.06712765022621,0.478278818186467,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0.156679895773023,0,0.50787533340481,0.321176150207399,0,0,0,0,0.894704431569664,0.166849141711909,0,0,0,0,0.33307196799782,0,0.18714054040822,0,1.09224469574562,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,0.828851746593443,0,0.20453736500431,0.492339221844278,0,0.0898683511473268,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,1.99613798001194,0.520855522170466,0.0874599999961957,0,0.341380344856499,0.254253650292766,0,0,0.291604613383254,0.520874984799877,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0.32681539055697,0,0.153900517007594,0.227884111694002,0.23056390438806,0.448788222048861,0.760531603454056,0.31900115973192,0,0,1.02193298195737,0.31396051279005,0.166211681900156,0,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0.424059214301822,0.432777279484182,0,0.0884575645033392,0.611030144933625,0,0,0.313265848516366,0,0,0.234264445725339,0.729819156862664,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0.379119477770928,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0.693373365065693,0,0.195984794828755,0.3482368263216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| ||
|short_description=p3@USP6NL | |short_description=p3@USP6NL | ||
}} | }} |
Latest revision as of 13:18, 16 September 2015
Short description: | p3@USP6NL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_USP6NL_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000535316, NM_014688, uc001ikt.3, uc001iku.3_5end |
EntrezGene: | USP6NL |
HGNC: | 16858 |
UniProt: | Q92738 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.30e-33 | 24 |
pro-B cell | 3.30e-33 | 24 |
B cell | 5.64e-33 | 14 |
lymphoid lineage restricted progenitor cell | 4.36e-22 | 52 |
lymphocyte | 1.31e-21 | 53 |
common lymphoid progenitor | 1.31e-21 | 53 |
hematopoietic lineage restricted progenitor cell | 1.10e-11 | 120 |
leukocyte | 6.49e-10 | 136 |
nongranular leukocyte | 1.82e-09 | 115 |
hematopoietic stem cell | 1.88e-09 | 168 |
hematopoietic oligopotent progenitor cell | 7.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.40e-09 | 161 |
hematopoietic cell | 9.17e-09 | 177 |
androgen binding protein secreting cell | 4.06e-07 | 1 |
seminiferous tubule epithelial cell | 4.06e-07 | 1 |
Sertoli cell | 4.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 3.33e-07 | 8 |
mesothelium | 4.06e-07 | 1 |
seminiferous tubule of testis | 4.06e-07 | 1 |
epithelium of male gonad | 4.06e-07 | 1 |
epithelial cord | 4.06e-07 | 1 |
sex cord | 4.06e-07 | 1 |
seminiferous tubule epithelium | 4.06e-07 | 1 |
testis sex cord | 4.06e-07 | 1 |
genital ridge | 4.06e-07 | 1 |
primitive sex cord of indifferent gonad | 4.06e-07 | 1 |
coelomic epithelium | 4.06e-07 | 1 |
lymph node | 4.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.29e-09 | 10 |