FFCP PHASE1:Hg19::chr1:236046574..236046580,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt=F5H074 | |UniProt=F5H074 | ||
|association_with_transcript=291bp_to_ENST00000536965_5end | |association_with_transcript=291bp_to_ENST00000536965_5end | ||
|cluster_id=chr1:236046574..236046580,- | |||
|description=CAGE_peak_19_at_LYST_5end | |description=CAGE_peak_19_at_LYST_5end | ||
|id=chr1:236046574..236046580,- | |id=chr1:236046574..236046580,- | ||
|ontology_enrichment_celltype=CL:0000148!2.71e-17!10;CL:0000541!2.71e-17!10;CL:0000453!1.09e-15!5;CL:0000990!4.30e-13!8;CL:0000147!3.60e-12!14;CL:0000710!4.17e-11!20;CL:0000451!1.16e-10!10;CL:0000075!5.67e-08!27;CL:0002567!1.01e-07!3;CL:0000333!1.44e-07!41;CL:0000133!2.33e-07!59 | |ontology_enrichment_celltype=CL:0000148!2.71e-17!10;CL:0000541!2.71e-17!10;CL:0000453!1.09e-15!5;CL:0000990!4.30e-13!8;CL:0000147!3.60e-12!14;CL:0000710!4.17e-11!20;CL:0000451!1.16e-10!10;CL:0000075!5.67e-08!27;CL:0002567!1.01e-07!3;CL:0000333!1.44e-07!41;CL:0000133!2.33e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.49e-45;10!CL:0002567;2.18e-38;3!CL:0000147;1.34e-32;14!CL:0002566;3.16e-29;1!CL:0000710;4.98e-23;20!CL:0000075;3.20e-17;27!CL:0002077;1.19e-13;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.79e-45,10;CL:0000541,2.79e-45,10;CL:0002567,2.64e-38,3;CL:0000147,1.45e-32,14;CL:0002566,4.20e-29,1;CL:0000710,5.27e-23,20;CL:0000075,3.34e-17,27;CL:0002077,8.88e-14,34;CL:0000333,5.30e-11,41;CL:0000133,6.88e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!3.14e-11!2 | |ontology_enrichment_disease=DOID:1909!3.14e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;6.36e-57;2!DOID:6193;7.48e-30;1!DOID:3350;1.15e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.77e-57,2;DOID:6193,7.48e-30,1;DOID:3350,1.15e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001896!2.47e-14!3;UBERON:0005290!2.47e-14!3;UBERON:0010096!2.47e-14!3 | |ontology_enrichment_uberon=UBERON:0001896!2.47e-14!3;UBERON:0005290!2.47e-14!3;UBERON:0010096!2.47e-14!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.59e-08;15!UBERON:0007376;1.59e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.53e-08,15;UBERON:0007376,1.53e-08,15;UBERON:0007383,1.53e-08,15 | |||
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|short_description=p19@LYST | |short_description=p19@LYST | ||
}} | }} |
Latest revision as of 13:20, 16 September 2015
Short description: | p19@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_LYST_5end |
Coexpression cluster: | NA |
Association with transcript: | 291bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.79e-45 | 10 |
melanoblast | 2.79e-45 | 10 |
light melanocyte | 2.64e-38 | 3 |
pigment cell | 1.45e-32 | 14 |
dark melanocyte | 4.20e-29 | 1 |
neurecto-epithelial cell | 5.27e-23 | 20 |
columnar/cuboidal epithelial cell | 3.34e-17 | 27 |
ecto-epithelial cell | 8.88e-14 | 34 |
migratory neural crest cell | 5.30e-11 | 41 |
neurectodermal cell | 6.88e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.53e-08 | 15 |
outer epithelium | 1.53e-08 | 15 |
enveloping layer of ectoderm | 1.53e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.77e-57 | 2 |
epithelioid sarcoma | 7.48e-30 | 1 |
mesenchymal cell neoplasm | 1.15e-15 | 2 |