FFCP PHASE1:Hg19::chr4:164909684..164909708,-: Difference between revisions
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|id=chr4:164909684..164909708,-
|short_description=p13@MARCH1
|description=CAGE_peak_13_at_MARCH1_5end
|association_with_transcript=364bp_to_ENST00000510696_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55016 | |EntrezGene=55016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26077 | |HGNC=26077 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=364bp_to_ENST00000510696_5end | |||
|cluster_id=chr4:164909684..164909708,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_13_at_MARCH1_5end | |||
|id=chr4:164909684..164909708,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.39e-53;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p13@MARCH1 | |||
}} | }} |
Latest revision as of 13:36, 16 September 2015
Short description: | p13@MARCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MARCH1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 364bp_to_ENST00000510696_5end |
EntrezGene: | MARCH1 |
HGNC: | 26077 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.34e-79 | 2 |
regional part of epithalamus | 2.34e-79 | 2 |
secretory circumventricular organ | 2.34e-79 | 2 |
circumventricular organ | 2.34e-79 | 2 |
epithalamus | 2.34e-79 | 2 |
gland of diencephalon | 2.22e-40 | 4 |
neuroendocrine gland | 2.22e-40 | 4 |
regional part of diencephalon | 2.22e-40 | 4 |
retina | 4.06e-27 | 6 |
photoreceptor array | 4.06e-27 | 6 |
posterior segment of eyeball | 4.06e-27 | 6 |
diencephalon | 1.28e-23 | 7 |
future diencephalon | 1.28e-23 | 7 |
eye | 9.85e-18 | 21 |
visual system | 9.85e-18 | 21 |
sense organ | 1.25e-15 | 24 |
sensory system | 1.25e-15 | 24 |
entire sense organ system | 1.25e-15 | 24 |
pre-chordal neural plate | 7.02e-11 | 61 |
camera-type eye | 6.69e-09 | 20 |
simple eye | 6.69e-09 | 20 |
immature eye | 6.69e-09 | 20 |
ocular region | 6.69e-09 | 20 |
eyeball of camera-type eye | 6.69e-09 | 20 |
optic cup | 6.69e-09 | 20 |
optic vesicle | 6.69e-09 | 20 |
eye primordium | 6.69e-09 | 20 |
neural plate | 2.75e-08 | 82 |
presumptive neural plate | 2.75e-08 | 82 |
face | 3.51e-08 | 22 |
neurectoderm | 6.20e-08 | 86 |