FFCP PHASE1:Hg19::chr11:125703204..125703221,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399968 | |EntrezGene=399968 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35427 | |HGNC=35427 | ||
|TSSclassifier=strong | |||
|UniProt=P0C8F1,E9PK74 | |UniProt=P0C8F1,E9PK74 | ||
|association_with_transcript=0bp_to_ENST00000457514,ENST00000525411,ENST00000534411,NM_001144874,uc001qcv.2,uc009zbt.1,uc009zbu.2_5end | |association_with_transcript=0bp_to_ENST00000457514,ENST00000525411,ENST00000534411,NM_001144874,uc001qcv.2,uc009zbt.1,uc009zbu.2_5end | ||
|cluster_id=chr11:125703204..125703221,+ | |||
|coexpression_cluster_id=C43 | |coexpression_cluster_id=C43 | ||
|description=CAGE_peak_1_at_PATE4_5end | |description=CAGE_peak_1_at_PATE4_5end | ||
|id=chr11:125703204..125703221,+ | |id=chr11:125703204..125703221,+ | ||
|ontology_enrichment_celltype=CL:0000764!2.72e-10!2;CL:0000765!2.72e-10!2;CL:0000050!2.72e-10!2;CL:0000038!2.72e-10!2;CL:0000558!2.72e-10!2;CL:0000547!2.72e-10!2;CL:0000549!2.72e-10!2;CL:0000550!2.72e-10!2;CL:0000552!2.72e-10!2 | |ontology_enrichment_celltype=CL:0000764!2.72e-10!2;CL:0000765!2.72e-10!2;CL:0000050!2.72e-10!2;CL:0000038!2.72e-10!2;CL:0000558!2.72e-10!2;CL:0000547!2.72e-10!2;CL:0000549!2.72e-10!2;CL:0000550!2.72e-10!2;CL:0000552!2.72e-10!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.04e-66;2!UBERON:0005754;1.84e-34;1!UBERON:0009847;2.89e-12;3!UBERON:0003353;2.89e-12;3!UBERON:0006603;1.24e-08;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006947;4.06e-99;3!UBERON:0004054;4.06e-99;3!UBERON:0005904;1.21e-74;4!UBERON:0003135;2.86e-48;11!UBERON:0003101;9.92e-38;22!UBERON:0000079;9.92e-38;22!UBERON:0000998;1.84e-34;1!UBERON:0006868;1.84e-34;1!UBERON:0001000;2.58e-34;1!UBERON:0005352;2.58e-34;1!UBERON:0001301;3.61e-34;1!UBERON:0000058;1.68e-30;10!UBERON:0001255;9.07e-18;2!UBERON:0001556;9.07e-18;2!UBERON:0000473;1.71e-17;8!UBERON:0004175;5.40e-15;21!UBERON:0003937;4.80e-12;12!UBERON:0005399;4.80e-12;12!UBERON:0005156;1.61e-09;59!UBERON:0000990;1.61e-09;59!UBERON:0003133;3.09e-08;44!UBERON:0000991;2.77e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.06e-99,3;UBERON:0004054,4.06e-99,3;UBERON:0005904,1.21e-74,4;UBERON:0003135,2.86e-48,11;UBERON:0003101,9.92e-38,22;UBERON:0000079,9.92e-38,22;UBERON:0000998,1.84e-34,1;UBERON:0006868,1.84e-34,1;UBERON:0001000,2.58e-34,1;UBERON:0005352,2.58e-34,1;UBERON:0001301,3.61e-34,1;UBERON:0003064,2.02e-19,28;UBERON:0001255,9.07e-18,2;UBERON:0001556,9.07e-18,2;UBERON:0000473,1.71e-17,8;UBERON:0000058,1.75e-16,19;UBERON:0000080,9.04e-16,9;UBERON:0002120,9.04e-16,9;UBERON:0004875,9.04e-16,9;UBERON:0005721,9.04e-16,9;UBERON:0005754,9.04e-16,9;UBERON:0007297,9.04e-16,9;UBERON:0005156,1.89e-14,59;UBERON:0000990,1.89e-14,59;UBERON:0004876,4.25e-13,11;UBERON:0004175,1.01e-12,25;UBERON:0003887,4.30e-12,12;UBERON:0003937,4.80e-12,12;UBERON:0005399,4.80e-12,12;UBERON:0006554,7.92e-12,47;UBERON:0003133,1.32e-11,48;UBERON:0001008,1.36e-11,48;UBERON:0007023,7.60e-11,114;UBERON:0000162,2.08e-10,14;UBERON:0001353,2.08e-10,14;UBERON:0000163,2.08e-10,14;UBERON:0006866,2.08e-10,14;UBERON:0000164,2.08e-10,14;UBERON:0000931,2.08e-10,14;UBERON:0000489,2.22e-10,31;UBERON:0003886,2.34e-10,54;UBERON:0004122,8.85e-10,15;UBERON:0002553,3.14e-09,61;UBERON:0001046,6.36e-08,19;UBERON:0000991,2.77e-07,21;UBERON:0009196,2.77e-07,21;UBERON:0009117,2.77e-07,21;UBERON:0005564,2.77e-07,21;UBERON:0002323,3.40e-07,46;UBERON:0004176,5.40e-07,22;UBERON:0004458,8.57e-07,49 | |||
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|short_description=p1@PATE4 | |short_description=p1@PATE4 | ||
}} | }} |
Latest revision as of 13:39, 16 September 2015
Short description: | p1@PATE4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PATE4_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 0bp_to_ENST00000457514, ENST00000525411, ENST00000534411, NM_001144874, uc001qcv.2, uc009zbt.1, uc009zbu.2_5end |
EntrezGene: | PATE4 |
HGNC: | 35427 |
UniProt: | P0C8F1E9PK74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data