FFCP PHASE1:Hg19::chr13:111837455..111837480,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8874 | |EntrezGene=8874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15607 | |HGNC=15607 | ||
|TSSclassifier=strong | |||
|UniProt=C9JDI6 | |UniProt=C9JDI6 | ||
|association_with_transcript=170bp_to_ENST00000467053_5end | |association_with_transcript=170bp_to_ENST00000467053_5end | ||
|cluster_id=chr13:111837455..111837480,+ | |||
|coexpression_cluster_id=C3353 | |||
|description=CAGE_peak_14_at_ARHGEF7_5end | |description=CAGE_peak_14_at_ARHGEF7_5end | ||
|id=chr13:111837455..111837480,+ | |id=chr13:111837455..111837480,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.20e-52!24;CL:0000826!2.20e-52!24;CL:0000236!3.80e-32!14;CL:0000542!3.92e-31!53;CL:0000051!3.92e-31!53;CL:0000838!3.26e-29!52;CL:0000738!2.24e-17!140;CL:0002087!7.29e-17!119;CL:0000037!3.00e-16!172;CL:0000566!3.00e-16!172;CL:0000988!9.28e-15!182;CL:0002031!1.72e-12!124;CL:0002032!1.78e-11!165;CL:0000837!1.78e-11!165;CL:0000817!1.26e-09!3;CL:0000784!3.88e-09!3;CL:0000785!6.67e-07!2;CL:0000955!6.67e-07!2;CL:0000818!6.67e-07!2;CL:0000954!6.67e-07!2;CL:0000816!6.67e-07!2 | |ontology_enrichment_celltype=CL:0000945!2.20e-52!24;CL:0000826!2.20e-52!24;CL:0000236!3.80e-32!14;CL:0000542!3.92e-31!53;CL:0000051!3.92e-31!53;CL:0000838!3.26e-29!52;CL:0000738!2.24e-17!140;CL:0002087!7.29e-17!119;CL:0000037!3.00e-16!172;CL:0000566!3.00e-16!172;CL:0000988!9.28e-15!182;CL:0002031!1.72e-12!124;CL:0002032!1.78e-11!165;CL:0000837!1.78e-11!165;CL:0000817!1.26e-09!3;CL:0000784!3.88e-09!3;CL:0000785!6.67e-07!2;CL:0000955!6.67e-07!2;CL:0000818!6.67e-07!2;CL:0000954!6.67e-07!2;CL:0000816!6.67e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.91e-90;24!CL:0000236;6.16e-51;13!CL:0000542;8.65e-32;53!CL:0000784;1.18e-17;3!CL:0000817;2.22e-07;1!CL:0000946;2.50e-07;1!CL:0000786;2.50e-07;1!CL:0002087;4.01e-07;104!CL:0002032;6.19e-07;1!CL:0000785;6.19e-07;1!CL:0000557;6.19e-07;1!CL:0000819;6.19e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.37e-91,24;CL:0000826,7.37e-91,24;CL:0000236,9.44e-57,14;CL:0000542,2.74e-47,53;CL:0000051,2.74e-47,53;CL:0000838,1.06e-43,52;CL:0002087,4.63e-21,115;CL:0000738,1.18e-20,136;CL:0000037,5.74e-19,168;CL:0000817,2.31e-18,3;CL:0002031,5.13e-18,120;CL:0000988,1.00e-17,177;CL:0000784,2.39e-17,3;CL:0002032,1.00e-16,161;CL:0000837,1.00e-16,161;CL:0000785,1.05e-12,2;CL:0000955,1.05e-12,2;CL:0000818,1.05e-12,2;CL:0000954,1.05e-12,2;CL:0000816,1.05e-12,2;CL:0000946,2.50e-07,1;CL:0000786,2.50e-07,1;CL:0000980,2.50e-07,1;CL:0000819,4.78e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;8.65e-32;53!CL:0000954;1.36e-12;2!UBERON:0001045;6.19e-07;1 | |||
|ontology_enrichment_disease=DOID:0060058!8.96e-13!10 | |ontology_enrichment_disease=DOID:0060058!8.96e-13!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.89e-09;10!DOID:12603;2.90e-07;1!DOID:0060073;6.19e-07;1!DOID:8675;6.19e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.61e-09,10;DOID:12603,3.17e-07,1;DOID:0060073,4.78e-07,1;DOID:8675,4.78e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.01e-09!7;UBERON:0002106!1.38e-08!3;UBERON:0004854!1.38e-08!3;UBERON:0009034!1.38e-08!3;UBERON:0002095!1.38e-08!3;UBERON:0004782!1.38e-08!3;UBERON:0003281!1.38e-08!3;UBERON:0009664!1.38e-08!3;UBERON:0002296!1.38e-08!3;UBERON:0005602!1.38e-08!3;UBERON:0001179!1.38e-08!3;UBERON:0006293!1.38e-08!3 | |ontology_enrichment_uberon=UBERON:0004177!4.01e-09!7;UBERON:0002106!1.38e-08!3;UBERON:0004854!1.38e-08!3;UBERON:0009034!1.38e-08!3;UBERON:0002095!1.38e-08!3;UBERON:0004782!1.38e-08!3;UBERON:0003281!1.38e-08!3;UBERON:0009664!1.38e-08!3;UBERON:0002296!1.38e-08!3;UBERON:0005602!1.38e-08!3;UBERON:0001179!1.38e-08!3;UBERON:0006293!1.38e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;6.19e-07;1!UBERON:0001153;6.19e-07;1!UBERON:0009854;6.19e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.69e-07,1;UBERON:0001153,5.69e-07,1;UBERON:0001045,5.69e-07,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9801228241701,3.11982239909794,2.75487734597877,0,0,0.154816123316076,0,0,0,8.28899046209227,4.40724620711007,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,6.00752472388345,1.77901850772711,3.84057200309856,4.80475184443215,2.87376219977242,3.30522436392431,0.954053754535364,2.27685187643779,2.93618594685469,2.6759125968766,1.32171328579026,1.68152568894461,2.63384084775077,0,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10037811596945,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0,0,0,1.08006287447623,0,0,0,0,4.27347302789153,7.50199907477513,0,0,0,0,0,0,0,4.33645890163065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,2.76283915531148,0,0,1.72318727645497,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,2.91927662745066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0.314408610199332,0,0,0,2.80122976276061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64646539023318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,0.469919589899268,2.51385763096951,0.599646935549574,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.258355639344024,0.993195428733726,0,0.0636471582781649,0,0.217716747896961,0,1.68380132536469,0,0,0,0,0,0,0,0,0,0,0.402547587182052,1.60284246151616 | ||
|short_description=p14@ARHGEF7 | |short_description=p14@ARHGEF7 | ||
}} | }} |
Latest revision as of 14:02, 16 September 2015
Short description: | p14@ARHGEF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ARHGEF7_5end |
Coexpression cluster: | C3353_Burkitt_acute_CD19_plasma_diffuse_B_xeroderma |
Association with transcript: | 170bp_to_ENST00000467053_5end |
EntrezGene: | ARHGEF7 |
HGNC: | 15607 |
UniProt: | C9JDI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.37e-91 | 24 |
pro-B cell | 7.37e-91 | 24 |
B cell | 9.44e-57 | 14 |
lymphocyte | 2.74e-47 | 53 |
common lymphoid progenitor | 2.74e-47 | 53 |
lymphoid lineage restricted progenitor cell | 1.06e-43 | 52 |
nongranular leukocyte | 4.63e-21 | 115 |
leukocyte | 1.18e-20 | 136 |
hematopoietic stem cell | 5.74e-19 | 168 |
precursor B cell | 2.31e-18 | 3 |
hematopoietic lineage restricted progenitor cell | 5.13e-18 | 120 |
hematopoietic cell | 1.00e-17 | 177 |
plasmacytoid dendritic cell | 2.39e-17 | 3 |
hematopoietic oligopotent progenitor cell | 1.00e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.00e-16 | 161 |
mature B cell | 1.05e-12 | 2 |
pre-B-II cell | 1.05e-12 | 2 |
transitional stage B cell | 1.05e-12 | 2 |
small pre-B-II cell | 1.05e-12 | 2 |
immature B cell | 1.05e-12 | 2 |
antibody secreting cell | 2.50e-07 | 1 |
plasma cell | 2.50e-07 | 1 |
plasmablast | 2.50e-07 | 1 |
B-1 B cell | 4.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.69e-07 | 1 |
caecum | 5.69e-07 | 1 |
midgut | 5.69e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.61e-09 | 10 |
acute leukemia | 3.17e-07 | 1 |
lymphatic system cancer | 4.78e-07 | 1 |
lymphosarcoma | 4.78e-07 | 1 |