FFCP PHASE1:Hg19::chr2:25862154..25862172,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1838 | |EntrezGene=1838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3058 | |HGNC=3058 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000460418_5end | |association_with_transcript=24bp_to_ENST00000460418_5end | ||
|cluster_id=chr2:25862154..25862172,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_14_at_DTNB_5end | |description=CAGE_peak_14_at_DTNB_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!3.33e-19!3;CL:0002536!3.28e-13!2;CL:0002537!1.77e-11!5;CL:0002368!1.12e-10!13 | |ontology_enrichment_celltype=CL:0002541!3.33e-19!3;CL:0002536!3.28e-13!2;CL:0002537!1.77e-11!5;CL:0002368!1.12e-10!13 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.10e-73;19!CL:0002541;5.00e-67;3!CL:0002536;1.22e-44;2!CL:0002537;9.69e-40;5!CL:0000134;2.03e-10;55!CL:0000723;1.27e-09;61!CL:0000048;6.28e-08;58!CL:0000034;8.38e-07;69 | |ontology_enrichment_celltype_v019=CL:0000349;2.10e-73;19!CL:0002541;5.00e-67;3!CL:0002536;1.22e-44;2!CL:0002537;9.69e-40;5!CL:0000134;2.03e-10;55!CL:0000723;1.27e-09;61!CL:0000048;6.28e-08;58!CL:0000034;8.38e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.31e-73,19;CL:0002541,5.01e-67,3;CL:0002536,1.22e-44,2;CL:0002537,1.11e-39,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.10e-23;1 | |ontology_enrichment_development_v019=UBERON:0003124;4.10e-23;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.95e-34!14;UBERON:0000158!8.95e-34!14;UBERON:0000305!1.56e-21!7;UBERON:0000476!3.33e-19!3;UBERON:0000920!3.33e-19!3;UBERON:0000478!4.67e-19!24;UBERON:0004871!8.11e-19!8;UBERON:0003124!2.70e-14!7;UBERON:0004923!9.06e-09!57 | |ontology_enrichment_uberon=UBERON:0005631!8.95e-34!14;UBERON:0000158!8.95e-34!14;UBERON:0000305!1.56e-21!7;UBERON:0000476!3.33e-19!3;UBERON:0000920!3.33e-19!3;UBERON:0000478!4.67e-19!24;UBERON:0004871!8.11e-19!8;UBERON:0003124!2.70e-14!7;UBERON:0004923!9.06e-09!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.25e-139;10!UBERON:0000158;3.25e-139;10!UBERON:0000305;1.34e-77;7!UBERON:0000478;1.93e-73;24!UBERON:0003124;5.00e-67;3!UBERON:0000920;5.00e-67;3!UBERON:0004923;1.10e-14;55!UBERON:0001987;9.10e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0005631;3.25e-139;10!UBERON:0000158;3.25e-139;10!UBERON:0000305;1.34e-77;7!UBERON:0000478;1.93e-73;24!UBERON:0003124;5.00e-67;3!UBERON:0000920;5.00e-67;3!UBERON:0004923;1.10e-14;55!UBERON:0001987;9.10e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.01e-125,14;UBERON:0000158,1.01e-125,14;UBERON:0000305,1.58e-77,7;UBERON:0000478,1.93e-73,24;UBERON:0004871,6.53e-68,8;UBERON:0000920,5.01e-67,3;UBERON:0003124,7.90e-51,7;UBERON:0004923,9.69e-27,66;UBERON:0001987,8.61e-07,4;UBERON:0004340,8.61e-07,4 | |||
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|short_description=p14@DTNB | |short_description=p14@DTNB | ||
}} | }} |
Latest revision as of 14:09, 16 September 2015
Short description: | p14@DTNB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_DTNB_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 24bp_to_ENST00000460418_5end |
EntrezGene: | DTNB |
HGNC: | 3058 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.31e-73 | 19 |
chorionic membrane mesenchymal stem cell | 5.01e-67 | 3 |
amniotic epithelial cell | 1.22e-44 | 2 |
amnion mesenchymal stem cell | 1.11e-39 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.01e-125 | 14 |
membranous layer | 1.01e-125 | 14 |
amnion | 1.58e-77 | 7 |
extraembryonic structure | 1.93e-73 | 24 |
somatic layer of lateral plate mesoderm | 6.53e-68 | 8 |
egg chorion | 5.01e-67 | 3 |
chorion | 7.90e-51 | 7 |
organ component layer | 9.69e-27 | 66 |
placenta | 8.61e-07 | 4 |
allantois | 8.61e-07 | 4 |