FFCP PHASE1:Hg19::chr12:115121802..115121814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6926 | |EntrezGene=6926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11602 | |HGNC=11602 | ||
|TSSclassifier=strong | |||
|UniProt=C9JIZ8,O15119 | |UniProt=C9JIZ8,O15119 | ||
|association_with_transcript=154bp_to_ENST00000349155,ENST00000361100,NM_005996,NM_016569,uc001tvt.1,uc001tvu.1,uc010syw.1_5end | |association_with_transcript=154bp_to_ENST00000349155,ENST00000361100,NM_005996,NM_016569,uc001tvt.1,uc001tvu.1,uc010syw.1_5end | ||
|cluster_id=chr12:115121802..115121814,- | |||
|description=CAGE_peak_5_at_TBX3_5end | |description=CAGE_peak_5_at_TBX3_5end | ||
|id=chr12:115121802..115121814,- | |id=chr12:115121802..115121814,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002552;8.76e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,6.83e-10,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.72e-13!347;UBERON:0000475!3.74e-11!365;UBERON:0003102!1.90e-10!95;UBERON:0000468!2.09e-10!659;UBERON:0003104!3.41e-10!238;UBERON:0009142!3.41e-10!238;UBERON:0005256!3.14e-09!143;UBERON:0007023!6.84e-09!115;UBERON:0000914!3.95e-08!83;UBERON:0002329!3.95e-08!83;UBERON:0003077!3.95e-08!83;UBERON:0003059!3.95e-08!83;UBERON:0007282!3.95e-08!83;UBERON:0009618!3.95e-08!83;UBERON:0007285!3.95e-08!83;UBERON:0000467!4.46e-08!625;UBERON:0000480!5.79e-08!626;UBERON:0002199!8.20e-08!45;UBERON:0002416!8.20e-08!45;UBERON:0000922!5.34e-07!612;UBERON:0000062!6.70e-07!511;UBERON:0004290!8.73e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.10e-08;5!UBERON:0002216;1.10e-08;5!UBERON:0011134;1.10e-08;5!UBERON:0002209;1.10e-08;5!UBERON:0002213;1.10e-08;5!UBERON:0007844;1.10e-08;5!UBERON:0011138;1.10e-08;5!UBERON:0001130;1.10e-08;5!UBERON:0001066;1.10e-08;5!UBERON:0001468;1.10e-08;5!UBERON:0000075;8.38e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,9.61e-09,160;UBERON:0009142,9.61e-09,160;UBERON:0011135,1.77e-08,5;UBERON:0002216,1.77e-08,5;UBERON:0011134,1.77e-08,5;UBERON:0002209,1.77e-08,5;UBERON:0002213,1.77e-08,5;UBERON:0005856,1.77e-08,5;UBERON:0005866,1.77e-08,5;UBERON:0005863,1.77e-08,5;UBERON:0007844,1.77e-08,5;UBERON:0011138,1.77e-08,5;UBERON:0001130,1.77e-08,5;UBERON:0001066,1.77e-08,5;UBERON:0001468,1.77e-08,5;UBERON:0003102,5.57e-08,99;UBERON:0000075,1.11e-07,16 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0,0,0,1.26343974685366,0.783556884599516,0.982935746006035,0,0,0,6.06455129504228,3.64537113300707,0,0,0,0.487932798790507,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.397227542439656,0,0,0,0,0.74000264525148,0,0.67355336034844,0.163461903113459,0.151357427644931,0,0.234321431833797,1.5608003841516,1.1409436430889,1.94283284717341,0.23486899728753,0,0,5.9204709663919,4.42203542322365,3.61640234115179,8.31602000097437,1.48360157567134,0,0,5.05008341862199,2.37725187756732,5.81834642516784,0,0,0.45071417671979,0.226864366320042,0.717558542755448,0,0.211931901159562,2.40072876867522,0.412210116953756,0.515281080091258,0.18611685633159,1.0126579934476,0.194874010322397,2.01947019395292,0.460249493211497,0,1.77504796258307,0.403008392910561,1.52604533079439,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,1.56449532329816,0.643240938192885,1.38134921352481,0,0,0.591534000199219,0.168584690078102,0.482022059766964,0.220587945464788,0.435758888184812,0.474541238222193,0.808987848960987,0.196221465125346,0.769494313892781,0,0,0,0,0,2.94848165003288,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0,0.253991577168676,0,0,0,0.205654985406647,0,0,0,0.43596006883328,0,0.517086863031111,0,0.845302752556,3.72313363218819,1.04007436911366,0.514414748524284,2.83698264046557,1.0656887160644,0.857867961948885,7.5967024754802,1.64648067356154,0.325736184293735,1.06617584622764,3.16780749173372,0,0,0,0,0,0,0,0,0,2.46128221334885,3.08214483825575,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,1.00034104211935,1.35632511849868,1.45579603071565,2.49800584316026,2.52323864054295,1.52283839490527,0,0,1.03473071292505,0,1.29058417979192,7.99329253106362,0.979005787313703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08419387605311,1.77561725313127,2.95657761649713,0,1.04589340613963,0,0.802025881213139,0,0.68888668898764,1.0925470080403,1.57349297951309,0,0.15403067420883,0,0,0,0,0,0,0,0.812839312631559,0.501689773854853,0,0,0,0,0,0,0,0,3.81251743096572,0.183138929636687,0,0.574265537996172,0.650060246036521,0,0.580024309752732,0.308097234229289,0,0.275673144969061,0.859361958946189,1.0151168573996,0.511359764496605,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,2.303080121802,4.70732886837312,0,0,0.179872457583315,0,0,0.202182481573316,0,0.421258456238981,0,0.731140468893853,0,1.9109987597118,0,0,0.551365343546124,1.32687795048244,0.876901770507525,2.31510213706675,4.59126326432643,0,0.30982349809975,0.845086807596724,0.860468113224309,0,0.7133421029625,7.44998234548255,0,0,0.379473173765715,0.349934720244983,0,0,0,4.33061483573184,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0.19924798825107,1.38141957765574,0,1.53403023753232,0,0,0,0.179021174675609,0,5.91860433821602,0,0,0,0.0927680981618513,0,0,0.174919999992391,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,2.6932590476329,0,0,0.897576444097721,0,0.638002319463839,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,3.05515072466813,0,0,0,0.67401132980677,0,0,0,0.19566461893209,0,5.91876604274086,2.41981432097328,0,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.698906672968121,0.171986032471617,0.774050650312681,1.97341156132701,0.492692742319255,0.290967049465258,0,0.90392296312213,0,0.596143835108969,0.0633107959558787,0,0.0801588202515337,1.28071796843612,0,0,0,0,0,0.124252535565433,0,0,0,2.03996435272644,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0.446342914883745,0.268733889946905,0,1.16495949527454,1.10296455230113,1.15382201733633,1.41547442093788,0,0,0,0,0,0,0.415440338029185,0,0,0.121499113316049,0.335434687599266,0.788057072991982,4.14391246266485,0,0,0.383830394638891,0.714695326373367,0,0,0,0,1.30634944043764,0,0,0.851940108927109,2.49286601344276,0.879313402068495,1.32506888912221,0.258565912723101,0.13223260174269,0,0,3.9511342650047,11.4759142722756,2.48543433208317,0,0,0,0,0.544017803369474,1.7548292581589,2.14441903734423,1.31149052283922,0.157054096250234,0.886068179966986,0,0.3755727921195,0,0,0.248385611765534,0.276697269872462,0,0.303298235083296,0,0.235265819698172,0,0.28984205722165,1.04478362020812,0,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0.466311601748341,0.295710299979268,2.23015474029183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| 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| ||
|short_description=p5@TBX3 | |short_description=p5@TBX3 | ||
}} | }} |
Latest revision as of 14:35, 16 September 2015
Short description: | p5@TBX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TBX3_5end |
Coexpression cluster: | NA |
Association with transcript: | 154bp_to_ENST00000349155, ENST00000361100, NM_005996, NM_016569, uc001tvt.1, uc001tvu.1, uc010syw.1_5end |
EntrezGene: | TBX3 |
HGNC: | 11602 |
UniProt: | C9JIZ8O15119 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 6.83e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 9.61e-09 | 160 |
entire embryonic mesenchyme | 9.61e-09 | 160 |
intervertebral cartilage | 1.77e-08 | 5 |
symphysis | 1.77e-08 | 5 |
nonsynovial joint | 1.77e-08 | 5 |
fibrous joint | 1.77e-08 | 5 |
cartilaginous joint | 1.77e-08 | 5 |
developing mesenchymal condensation | 1.77e-08 | 5 |
pre-cartilage condensation | 1.77e-08 | 5 |
cartilaginous condensation | 1.77e-08 | 5 |
cartilage element | 1.77e-08 | 5 |
post-cranial axial skeletal system | 1.77e-08 | 5 |
vertebral column | 1.77e-08 | 5 |
intervertebral disk | 1.77e-08 | 5 |
intervertebral joint | 1.77e-08 | 5 |
surface structure | 5.57e-08 | 99 |
subdivision of skeletal system | 1.11e-07 | 16 |