FFCP PHASE1:Hg19::chr2:264557..264588,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26751 | |EntrezGene=26751 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29546 | |HGNC=29546 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000488979_5end | |association_with_transcript=0bp_to_ENST00000488979_5end | ||
|cluster_id=chr2:264557..264588,- | |||
|description=CAGE_peak_4_at_SH3YL1_5end | |description=CAGE_peak_4_at_SH3YL1_5end | ||
|id=chr2:264557..264588,- | |id=chr2:264557..264588,- | ||
|ontology_enrichment_celltype=CL:0000066!1.40e-13!254;CL:0000223!3.55e-09!59;CL:0002076!8.73e-09!43 | |ontology_enrichment_celltype=CL:0000066!1.40e-13!254;CL:0000223!3.55e-09!59;CL:0002076!8.73e-09!43 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.94e-07;7!CL:0000586;1.94e-07;7!CL:0002535;4.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.22e-11,253;CL:0000039,2.89e-07,7;CL:0000586,2.89e-07,7;CL:0002535,5.24e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.00e-16!106;DOID:0050687!7.08e-13!143;DOID:162!8.56e-07!235 | |ontology_enrichment_disease=DOID:305!4.00e-16!106;DOID:0050687!7.08e-13!143;DOID:162!8.56e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.18e-10;14!DOID:305;8.00e-08;106!DOID:3119;9.25e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.09e-17,106;DOID:0050687,3.23e-14,143;DOID:1749,1.06e-09,14;DOID:162,7.43e-08,235;DOID:14566,1.62e-07,239;DOID:3119,3.99e-07,14;DOID:3493,7.47e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.97e-11!169;UBERON:0000925!8.97e-11!169;UBERON:0006595!8.97e-11!169;UBERON:0001007!3.21e-09!155;UBERON:0001555!3.21e-09!155;UBERON:0007026!3.21e-09!155;UBERON:0004921!2.19e-08!129;UBERON:0004185!2.19e-08!129;UBERON:0000466!3.55e-07!126;UBERON:0000464!3.78e-07!104;UBERON:0005911!4.07e-07!82;UBERON:0000077!7.83e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;3.94e-07;4!UBERON:0003928;3.94e-07;4!UBERON:0005631;3.94e-07;10!UBERON:0000158;3.94e-07;10!UBERON:0006955;4.81e-07;2!UBERON:0004801;4.81e-07;2!UBERON:0002294;5.03e-07;7!UBERON:0001173;5.03e-07;7!UBERON:0000058;5.86e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.24e-07,2;UBERON:0004801,5.24e-07,2;UBERON:0005631,5.31e-07,14;UBERON:0000158,5.31e-07,14;UBERON:0004119,5.41e-07,160;UBERON:0000925,5.41e-07,160;UBERON:0006595,5.41e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.125542639594803,0,0.0821005894499457,0.314843125254717,0,0.383829398097213,0,1.83884244895785,0,0.739508020333575,0.0774672005803016,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0.443067789167242,0.270803863765016,0.25618263945135,0,0,0,0,0.296573126324121,0.535081656179426,0,0,0,0.34362744548263,0.759059076058509,0,0.651083453856419,0,0.602300476311091,0.639933055772092,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,1.00416183829401,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.872188104285069,0,0.633152558322899,0,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0,0.194874010322397,0,0.0920498986422993,0.484938170456436,0,0,0,0.193260853163297,0.545492241181669,0.573609190778008,1.21973706129595,0.927708378250397,1.62671520017326,0.414644220061482,1.51392510525377,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0,0,1.22988438543114,0,0.329250856225877,0,1.60846355858609,1.66659201285353,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.626909658919938,1.16253575405585,0,0,0.088048434013226,0.414656231081544,0.432359860250884,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.413536052245775,0,0.106727557803444,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.232420756919918,0.966875596732978,0.200506470303285,0.644566922551274,0,0.182091168006717,0,0.902399225814824,0.462092022626489,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0.501689773854853,0.764628819135115,0,0.223874754722178,0.219259876645935,0,0.512900250232778,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.826424576804891,0.960950336825531,1.14851441245126,1.31505115112215,0,0,0,0.616067160352178,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0,0,0.769776901804097,0,0,0.941438007767792,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0.411362273086194,0,0,0,0,0,0.490080431962063,0,0,0.0711418433484141,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,1.8714054040822,0.293016358543788,0.242721043499027,0,0.284136146806413,1.43246690842614,2.37571744666111,1.22864280839693,0,0.281338832821026,0,0.824019371133798,0.422250816255987,0.19924798825107,0.828851746593443,3.27512572210559,0,0,0,1.79736702294654,1.43216939740487,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.520855522170466,2.18649999990489,0.724999575434793,3.64139034513599,1.77977555204936,0.472775363535873,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0,0,0.975966209950223,0.461701551022782,0.113942055847001,4.15015027898508,0.897576444097721,3.15077378573823,1.91400695839152,0.915975934018623,2.66517388009317,1.02193298195737,0.156980256395025,0,0,0,0,0.189753732724185,0.158936578980379,0.421996129056054,1.46909527343233,1.83758992864123,0,1.99052386215701,0.796118080530053,0,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0.586993856796269,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,1.17590876897253,1.39294730528644,0.34945333648406,0,0,0,0,0.290967049465258,0.264768380074501,0,0,0,0.253243183823515,3.12882212375685,0.801588202515337,0,0.19980960958213,0.72045208577053,0.114536596165916,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,1.19807400299395,0,0,0,0,3.49487848582361,0.315132729228895,0.576911008668165,0.26961417541674,0,0,0,0.136203406111576,0.643012593860077,0.687697182986169,0,0.2249738915515,0,0.121499113316049,0.670869375198532,1.33969702408637,0.786818822024972,0,0,0.191915197319445,0,0,1.017074150619,0.542999601753713,0,0,0,0.65674016599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| 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| ||
|short_description=p4@SH3YL1 | |short_description=p4@SH3YL1 | ||
}} | }} |
Latest revision as of 14:50, 16 September 2015
Short description: | p4@SH3YL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SH3YL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000488979_5end |
EntrezGene: | SH3YL1 |
HGNC: | 29546 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.22e-11 | 253 |
germ line cell | 2.89e-07 | 7 |
germ cell | 2.89e-07 | 7 |
epithelial cell of cervix | 5.24e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.24e-07 | 2 |
cervix epithelium | 5.24e-07 | 2 |
extraembryonic membrane | 5.31e-07 | 14 |
membranous layer | 5.31e-07 | 14 |
endoderm-derived structure | 5.41e-07 | 160 |
endoderm | 5.41e-07 | 160 |
presumptive endoderm | 5.41e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.09e-17 | 106 |
cell type cancer | 3.23e-14 | 143 |
squamous cell carcinoma | 1.06e-09 | 14 |
cancer | 7.43e-08 | 235 |
disease of cellular proliferation | 1.62e-07 | 239 |
gastrointestinal system cancer | 3.99e-07 | 14 |
signet ring cell adenocarcinoma | 7.47e-07 | 2 |