FFCP PHASE1:Hg19::chr2:11680114..11680122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9687 | |EntrezGene=9687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |HGNC=24885 | ||
|TSSclassifier=strong | |||
|UniProt=Q4ZG55 | |UniProt=Q4ZG55 | ||
|association_with_transcript=34bp_to_NM_148903,uc002rbl.2_5end | |association_with_transcript=34bp_to_NM_148903,uc002rbl.2_5end | ||
|cluster_id=chr2:11680114..11680122,+ | |||
|coexpression_cluster_id=C1879 | |coexpression_cluster_id=C1879 | ||
|description=CAGE_peak_15_at_GREB1_5end | |description=CAGE_peak_15_at_GREB1_5end | ||
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|ontology_enrichment_celltype=CL:0002541!1.79e-08!3;CL:0000167!7.15e-07!1;CL:0000164!7.15e-07!1;CL:0000502!7.15e-07!1;CL:0000172!7.15e-07!1;CL:0000173!7.15e-07!1;CL:0002351!7.15e-07!1 | |ontology_enrichment_celltype=CL:0002541!1.79e-08!3;CL:0000167!7.15e-07!1;CL:0000164!7.15e-07!1;CL:0000502!7.15e-07!1;CL:0000172!7.15e-07!1;CL:0000173!7.15e-07!1;CL:0002351!7.15e-07!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.04e-20;10!UBERON:0005564;2.04e-20;10!UBERON:0007297;2.90e-12;2 | |ontology_enrichment_development_v019=UBERON:0009117;2.04e-20;10!UBERON:0005564;2.04e-20;10!UBERON:0007297;2.90e-12;2 | ||
|ontology_enrichment_disease=DOID:5093!4.70e-14!4;DOID:1612!4.70e-14!4;DOID:4430!7.15e-07!1;DOID:0050619!8.98e-07!1;DOID:1357!8.98e-07!1 | |ontology_enrichment_disease=DOID:5093!4.70e-14!4;DOID:1612!4.70e-14!4;DOID:4430!7.15e-07!1;DOID:0050619!8.98e-07!1;DOID:1357!8.98e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5093;5.16e-50;4!DOID:1612;5.16e-50;4!DOID:299;1.27e-08;25!DOID:7;2.38e-07;39 | |ontology_enrichment_disease_v019=DOID:5093;5.16e-50;4!DOID:1612;5.16e-50;4!DOID:299;1.27e-08;25!DOID:7;2.38e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,5.16e-50,4;DOID:1612,5.16e-50,4;DOID:7,1.86e-09,39;DOID:299,1.27e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0003135!3.35e-18!11;UBERON:0006947!9.68e-18!3;UBERON:0004054!9.68e-18!3;UBERON:0001896!5.52e-17!3;UBERON:0005290!5.52e-17!3;UBERON:0010096!5.52e-17!3;UBERON:0007023!5.11e-15!115;UBERON:0005904!1.93e-13!4;UBERON:0003101!9.58e-12!22;UBERON:0000079!9.58e-12!22;UBERON:0000473!1.26e-11!8;UBERON:0002298!2.78e-11!8;UBERON:0003133!3.86e-10!48;UBERON:0000310!1.18e-09!10;UBERON:0005156!1.38e-09!59;UBERON:0000990!1.38e-09!59;UBERON:0001443!8.79e-09!11;UBERON:0000476!1.79e-08!3;UBERON:0000920!1.79e-08!3;UBERON:0003124!9.78e-08!7;UBERON:0004175!1.08e-07!25;UBERON:0006834!2.09e-07!1;UBERON:0001301!3.36e-07!1;UBERON:0006122!4.01e-07!1;UBERON:0000998!5.69e-07!1;UBERON:0006868!5.69e-07!1;UBERON:0001000!6.02e-07!1;UBERON:0005352!6.02e-07!1;UBERON:0001764!8.98e-07!1;UBERON:0001825!8.98e-07!1;UBERON:0002363!9.51e-07!1;UBERON:0007647!9.51e-07!1;UBERON:0010115!9.51e-07!1 | |ontology_enrichment_uberon=UBERON:0003135!3.35e-18!11;UBERON:0006947!9.68e-18!3;UBERON:0004054!9.68e-18!3;UBERON:0001896!5.52e-17!3;UBERON:0005290!5.52e-17!3;UBERON:0010096!5.52e-17!3;UBERON:0007023!5.11e-15!115;UBERON:0005904!1.93e-13!4;UBERON:0003101!9.58e-12!22;UBERON:0000079!9.58e-12!22;UBERON:0000473!1.26e-11!8;UBERON:0002298!2.78e-11!8;UBERON:0003133!3.86e-10!48;UBERON:0000310!1.18e-09!10;UBERON:0005156!1.38e-09!59;UBERON:0000990!1.38e-09!59;UBERON:0001443!8.79e-09!11;UBERON:0000476!1.79e-08!3;UBERON:0000920!1.79e-08!3;UBERON:0003124!9.78e-08!7;UBERON:0004175!1.08e-07!25;UBERON:0006834!2.09e-07!1;UBERON:0001301!3.36e-07!1;UBERON:0006122!4.01e-07!1;UBERON:0000998!5.69e-07!1;UBERON:0006868!5.69e-07!1;UBERON:0001000!6.02e-07!1;UBERON:0005352!6.02e-07!1;UBERON:0001764!8.98e-07!1;UBERON:0001825!8.98e-07!1;UBERON:0002363!9.51e-07!1;UBERON:0007647!9.51e-07!1;UBERON:0010115!9.51e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.07e-23;1!UBERON:0001301;4.10e-23;1!UBERON:0000310;1.57e-20;10!UBERON:0001443;9.78e-19;11!UBERON:0003135;1.58e-18;11!UBERON:0000473;6.51e-12;8!UBERON:0000991;4.30e-10;21!UBERON:0003101;1.30e-09;22!UBERON:0000079;1.30e-09;22!UBERON:0006947;1.30e-08;3!UBERON:0004054;1.30e-08;3!UBERON:0003133;2.89e-08;44!UBERON:0005904;9.10e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0006834;1.07e-23;1!UBERON:0001301;4.10e-23;1!UBERON:0000310;1.57e-20;10!UBERON:0001443;9.78e-19;11!UBERON:0003135;1.58e-18;11!UBERON:0000473;6.51e-12;8!UBERON:0000991;4.30e-10;21!UBERON:0003101;1.30e-09;22!UBERON:0000079;1.30e-09;22!UBERON:0006947;1.30e-08;3!UBERON:0004054;1.30e-08;3!UBERON:0003133;2.89e-08;44!UBERON:0005904;9.10e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.07e-23,1;UBERON:0001301,6.40e-23,1;UBERON:0000310,1.57e-20,10;UBERON:0001443,9.78e-19,11;UBERON:0003135,1.68e-18,11;UBERON:0000473,6.16e-12,8;UBERON:0003133,1.17e-11,48;UBERON:0000991,4.17e-10,21;UBERON:0009196,4.17e-10,21;UBERON:0009117,4.17e-10,21;UBERON:0005564,4.17e-10,21;UBERON:0004176,1.12e-09,22;UBERON:0003101,1.34e-09,22;UBERON:0000079,1.34e-09,22;UBERON:0005156,1.63e-09,59;UBERON:0000990,1.63e-09,59;UBERON:0006947,1.51e-08,3;UBERON:0004054,1.51e-08,3;UBERON:0003886,7.05e-07,54 | |||
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|short_description=p15@GREB1 | |short_description=p15@GREB1 | ||
}} | }} |
Latest revision as of 15:07, 16 September 2015
Short description: | p15@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_GREB1_5end |
Coexpression cluster: | C1879_ovary_MCF7_breast_hepatocellular_uterus_epididymis_testis |
Association with transcript: | 34bp_to_NM_148903, uc002rbl.2_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | Q4ZG55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.07e-23 | 1 |
epididymis | 6.40e-23 | 1 |
breast | 1.57e-20 | 10 |
chest | 9.78e-19 | 11 |
male reproductive organ | 1.68e-18 | 11 |
testis | 6.16e-12 | 8 |
reproductive organ | 1.17e-11 | 48 |
gonad | 4.17e-10 | 21 |
indifferent external genitalia | 4.17e-10 | 21 |
indifferent gonad | 4.17e-10 | 21 |
gonad primordium | 4.17e-10 | 21 |
external genitalia | 1.12e-09 | 22 |
male organism | 1.34e-09 | 22 |
male reproductive system | 1.34e-09 | 22 |
reproductive structure | 1.63e-09 | 59 |
reproductive system | 1.63e-09 | 59 |
male genital duct | 1.51e-08 | 3 |
internal male genitalia | 1.51e-08 | 3 |
body cavity precursor | 7.05e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.16e-50 | 4 |
breast cancer | 5.16e-50 | 4 |
disease of anatomical entity | 1.86e-09 | 39 |
adenocarcinoma | 1.27e-08 | 25 |