FFCP PHASE1:Hg19::chrX:99839925..99839938,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64102 | |EntrezGene=64102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17757 | |HGNC=17757 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2S6 | |UniProt=Q9H2S6 | ||
|association_with_transcript=126bp_to_ENST00000373031_5end | |association_with_transcript=126bp_to_ENST00000373031_5end | ||
|cluster_id=chrX:99839925..99839938,+ | |||
|coexpression_cluster_id=C134 | |coexpression_cluster_id=C134 | ||
|description=CAGE_peak_1_at_TNMD_5end | |description=CAGE_peak_1_at_TNMD_5end | ||
|id=chrX:99839925..99839938,+ | |id=chrX:99839925..99839938,+ | ||
|ontology_enrichment_celltype=CL:0000136;5.58e-07;13 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000136;5.58e-07;13 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.77e-12;2!UBERON:0000358;2.82e-07;1!UBERON:0004874;3.17e-07;1!UBERON:0005754;3.78e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0006947;8.64e-18;3!UBERON:0004054;8.64e-18;3!UBERON:0005904;1.77e-13;4!UBERON:0000341;1.67e-12;2!UBERON:0003135;1.51e-08;11!UBERON:0001723;4.68e-08;3!UBERON:0001033;4.68e-08;3!UBERON:0002426;2.43e-07;1!UBERON:0003831;2.43e-07;1!UBERON:0003898;2.43e-07;1!UBERON:0004830;2.43e-07;1!UBERON:0003830;2.43e-07;1!UBERON:0005175;2.43e-07;1!UBERON:0001774;2.43e-07;1!UBERON:0001103;2.43e-07;1!UBERON:0007029;2.66e-07;1!UBERON:0000922;3.00e-07;49!UBERON:0000989;3.17e-07;1!UBERON:0008811;3.17e-07;1!UBERON:0000998;3.78e-07;1!UBERON:0006868;3.78e-07;1!UBERON:0001000;5.06e-07;1!UBERON:0005352;5.06e-07;1!UBERON:0001301;5.36e-07;1 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.63e-09!115;UBERON:0000059!1.74e-08!11;UBERON:0006947!5.71e-08!3;UBERON:0004054!5.71e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.64e-18;3!UBERON:0004054;8.64e-18;3!UBERON:0005904;1.77e-13;4!UBERON:0000341;1.67e-12;2!UBERON:0003135;1.51e-08;11!UBERON:0001723;4.68e-08;3!UBERON:0001033;4.68e-08;3!UBERON:0002426;2.43e-07;1!UBERON:0003831;2.43e-07;1!UBERON:0003898;2.43e-07;1!UBERON:0004830;2.43e-07;1!UBERON:0003830;2.43e-07;1!UBERON:0005175;2.43e-07;1!UBERON:0001774;2.43e-07;1!UBERON:0001103;2.43e-07;1!UBERON:0007029;2.66e-07;1!UBERON:0000922;3.00e-07;49!UBERON:0000989;3.17e-07;1!UBERON:0008811;3.17e-07;1!UBERON:0000998;3.78e-07;1!UBERON:0006868;3.78e-07;1!UBERON:0001000;5.06e-07;1!UBERON:0005352;5.06e-07;1!UBERON:0001301;5.36e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.16e-18,3;UBERON:0004054,8.16e-18,3;UBERON:0005904,1.70e-13,4;UBERON:0000341,1.77e-12,2;UBERON:0003135,1.45e-08,11;UBERON:0004876,2.10e-08,11;UBERON:0001723,4.68e-08,3;UBERON:0001033,4.68e-08,3;UBERON:0010056,4.68e-08,3;UBERON:0002426,2.50e-07,1;UBERON:0003831,2.50e-07,1;UBERON:0003898,2.50e-07,1;UBERON:0004830,2.50e-07,1;UBERON:0003830,2.50e-07,1;UBERON:0005175,2.50e-07,1;UBERON:0001774,2.50e-07,1;UBERON:0001103,2.50e-07,1;UBERON:0010084,2.50e-07,1;UBERON:0007029,2.66e-07,1;UBERON:0000989,2.99e-07,1;UBERON:0008811,2.99e-07,1;UBERON:0006258,2.99e-07,1;UBERON:0005876,2.99e-07,1;UBERON:0004874,2.99e-07,1;UBERON:0000998,3.57e-07,1;UBERON:0006868,3.57e-07,1;UBERON:0001000,5.06e-07,1;UBERON:0005352,5.06e-07,1;UBERON:0001301,5.37e-07,1 | |||
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| ||
|short_description=p1@TNMD | |short_description=p1@TNMD | ||
}} | }} |
Latest revision as of 15:51, 16 September 2015
Short description: | p1@TNMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNMD_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 126bp_to_ENST00000373031_5end |
EntrezGene: | TNMD |
HGNC: | 17757 |
UniProt: | Q9H2S6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.16e-18 | 3 |
internal male genitalia | 8.16e-18 | 3 |
duct of male reproductive system | 1.70e-13 | 4 |
throat | 1.77e-12 | 2 |
male reproductive organ | 1.45e-08 | 11 |
urogenital ridge | 2.10e-08 | 11 |
tongue | 4.68e-08 | 3 |
gustatory system | 4.68e-08 | 3 |
future tongue | 4.68e-08 | 3 |
chest muscle | 2.50e-07 | 1 |
respiratory system muscle | 2.50e-07 | 1 |
skeletal muscle of trunk | 2.50e-07 | 1 |
respiratory system skeletal muscle | 2.50e-07 | 1 |
thoracic segment muscle | 2.50e-07 | 1 |
chest organ | 2.50e-07 | 1 |
muscle of trunk | 2.50e-07 | 1 |
diaphragm | 2.50e-07 | 1 |
future diaphragm | 2.50e-07 | 1 |
surface | 2.66e-07 | 1 |
penis | 2.99e-07 | 1 |
intromittent organ | 2.99e-07 | 1 |
lateral plate mesenchyme | 2.99e-07 | 1 |
undifferentiated genital tubercle | 2.99e-07 | 1 |
somatopleure | 2.99e-07 | 1 |
seminal vesicle | 3.57e-07 | 1 |
seminal fluid secreting gland | 3.57e-07 | 1 |
vas deferens | 5.06e-07 | 1 |
spermatic cord | 5.06e-07 | 1 |
epididymis | 5.37e-07 | 1 |