FFCP PHASE1:Hg19::chrX:99848833..99848846,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64102 | |EntrezGene=64102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17757 | |HGNC=17757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=212bp_to_ENST00000485971_5end | |association_with_transcript=212bp_to_ENST00000485971_5end | ||
|cluster_id=chrX:99848833..99848846,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_2_at_TNMD_5end | |description=CAGE_peak_2_at_TNMD_5end | ||
|id=chrX:99848833..99848846,+ | |id=chrX:99848833..99848846,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.12e-22!15;CL:0002615!4.04e-14!3;CL:0002617!1.04e-09!2;CL:0000325!1.17e-07!39 | |ontology_enrichment_celltype=CL:0000136!1.12e-22!15;CL:0002615!4.04e-14!3;CL:0002617!1.04e-09!2;CL:0000325!1.17e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.14e-74;13!CL:0002615;4.07e-59;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.87e-64,15;CL:0002615,4.07e-59,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.98e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.76e-18!115;UBERON:0000341!2.64e-09!2;UBERON:0003688!2.96e-07!6;UBERON:0002358!2.96e-07!6;UBERON:0003684!2.96e-07!6;UBERON:0001178!2.96e-07!6 | |ontology_enrichment_uberon=UBERON:0007023!6.76e-18!115;UBERON:0000341!2.64e-09!2;UBERON:0003688!2.96e-07!6;UBERON:0002358!2.96e-07!6;UBERON:0003684!2.96e-07!6;UBERON:0001178!2.96e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.07e-30;6!UBERON:0002358;5.07e-30;6!UBERON:0003684;5.07e-30;6!UBERON:0001178;5.07e-30;6!UBERON:0001389;6.98e-21;1!UBERON:0000026;6.98e-21;1!UBERON:0008784;6.98e-21;1!UBERON:0006058;6.98e-21;1!UBERON:0003663;6.98e-21;1!UBERON:0004256;6.98e-21;1!UBERON:0004708;6.98e-21;1!UBERON:0002101;6.98e-21;1!UBERON:0004709;6.98e-21;1!UBERON:0002529;6.98e-21;1!UBERON:0010538;6.98e-21;1!UBERON:0003661;6.98e-21;1!UBERON:0010890;6.98e-21;1!UBERON:0002471;6.98e-21;1!UBERON:0001383;6.98e-21;1!UBERON:0010758;6.98e-21;1!UBERON:0010707;6.98e-21;1!UBERON:0000978;6.98e-21;1!UBERON:0002103;6.98e-21;1!UBERON:0001665;6.98e-21;1!UBERON:0003823;6.98e-21;1!UBERON:0000154;6.98e-21;1!UBERON:0010709;6.98e-21;1!UBERON:0004457;2.75e-20;9!UBERON:0000042;2.75e-20;9!UBERON:0005090;3.89e-11;2!UBERON:0001630;3.89e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.07e-30,6;UBERON:0002358,5.07e-30,6;UBERON:0003684,5.07e-30,6;UBERON:0001178,5.07e-30,6;UBERON:0005418,6.31e-21,1;UBERON:0001389,6.31e-21,1;UBERON:0000026,6.31e-21,1;UBERON:0008784,6.31e-21,1;UBERON:0006058,6.31e-21,1;UBERON:0003663,6.31e-21,1;UBERON:0004256,6.31e-21,1;UBERON:0004708,6.31e-21,1;UBERON:0002101,6.31e-21,1;UBERON:0004709,6.31e-21,1;UBERON:0002529,6.31e-21,1;UBERON:0010538,6.31e-21,1;UBERON:0003661,6.31e-21,1;UBERON:0010890,6.31e-21,1;UBERON:0002471,6.31e-21,1;UBERON:0001383,6.31e-21,1;UBERON:0004357,6.31e-21,1;UBERON:0004347,6.31e-21,1;UBERON:0005420,6.31e-21,1;UBERON:0005732,6.31e-21,1;UBERON:0010758,6.31e-21,1;UBERON:0010707,6.31e-21,1;UBERON:0000978,6.31e-21,1;UBERON:0002103,6.31e-21,1;UBERON:0001665,6.31e-21,1;UBERON:0003823,6.31e-21,1;UBERON:0000154,6.31e-21,1;UBERON:0010709,6.31e-21,1;UBERON:0005733,6.31e-21,1;UBERON:0005730,6.31e-21,1;UBERON:0004457,2.12e-15,12;UBERON:0000042,2.12e-15,12;UBERON:0005090,3.70e-11,2;UBERON:0001630,3.70e-11,2 | |||
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| ||
|short_description=p2@TNMD | |short_description=p2@TNMD | ||
}} | }} |
Latest revision as of 15:54, 16 September 2015
Short description: | p2@TNMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNMD_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 212bp_to_ENST00000485971_5end |
EntrezGene: | TNMD |
HGNC: | 17757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.87e-64 | 15 |
adipocyte of omentum tissue | 4.07e-59 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.07e-30 | 6 |
peritoneum | 5.07e-30 | 6 |
abdominal cavity | 5.07e-30 | 6 |
visceral peritoneum | 5.07e-30 | 6 |
hindlimb bud | 6.31e-21 | 1 |
soleus muscle | 6.31e-21 | 1 |
appendage | 6.31e-21 | 1 |
lower limb segment | 6.31e-21 | 1 |
multi-limb segment region | 6.31e-21 | 1 |
hindlimb muscle | 6.31e-21 | 1 |
hindlimb zeugopod muscle | 6.31e-21 | 1 |
paired limb/fin | 6.31e-21 | 1 |
limb | 6.31e-21 | 1 |
pelvic appendage | 6.31e-21 | 1 |
limb segment | 6.31e-21 | 1 |
paired limb/fin segment | 6.31e-21 | 1 |
limb muscle | 6.31e-21 | 1 |
pelvic complex muscle | 6.31e-21 | 1 |
zeugopod | 6.31e-21 | 1 |
muscle of leg | 6.31e-21 | 1 |
paired limb/fin bud | 6.31e-21 | 1 |
limb bud | 6.31e-21 | 1 |
pelvic appendage bud | 6.31e-21 | 1 |
limb/fin field | 6.31e-21 | 1 |
subdivision of organism along appendicular axis | 6.31e-21 | 1 |
appendage girdle complex | 6.31e-21 | 1 |
leg | 6.31e-21 | 1 |
hindlimb | 6.31e-21 | 1 |
triceps surae | 6.31e-21 | 1 |
hindlimb zeugopod | 6.31e-21 | 1 |
posterior region of body | 6.31e-21 | 1 |
pelvic complex | 6.31e-21 | 1 |
limb field | 6.31e-21 | 1 |
hindlimb/pelvic fin field | 6.31e-21 | 1 |
cavity lining | 2.12e-15 | 12 |
serous membrane | 2.12e-15 | 12 |
muscle structure | 3.70e-11 | 2 |
muscle organ | 3.70e-11 | 2 |