FFCP PHASE1:Hg19::chr2:27434635..27434669,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8884 | |EntrezGene=8884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11041 | |HGNC=11041 | ||
|TSSclassifier=strong | |||
|UniProt=E7EW78 | |UniProt=E7EW78 | ||
|association_with_transcript=0bp_to_ENST00000401463_5end | |association_with_transcript=0bp_to_ENST00000401463_5end | ||
|cluster_id=chr2:27434635..27434669,- | |||
|description=CAGE_peak_4_at_SLC5A6_5end | |description=CAGE_peak_4_at_SLC5A6_5end | ||
|id=chr2:27434635..27434669,- | |id=chr2:27434635..27434669,- | ||
|ontology_enrichment_celltype=CL:0000066!1.40e-10!254 | |ontology_enrichment_celltype=CL:0000066!1.40e-10!254 | ||
|ontology_enrichment_celltype_v019=CL:1000449;5.35e-08;15!CL:1000497;1.72e-07;17!CL:0002518;1.72e-07;17!CL:0002681;2.25e-07;12!CL:0002584;2.25e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,4.65e-08,15;CL:0000066,1.56e-07,253;CL:0002681,1.93e-07,12;CL:0002584,1.93e-07,12;CL:1000497,2.13e-07,17;CL:0002518,2.13e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.26e-09!143;DOID:3095!3.25e-08!22;DOID:2994!3.25e-08!22;DOID:162!6.95e-08!235;DOID:305!7.05e-07!106;DOID:14566!8.05e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.80e-10;22!DOID:2994;4.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.33e-10,22;DOID:2994,3.33e-10,22;DOID:0050687,3.53e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000064!3.20e-11!219;UBERON:0005172!7.89e-09!55;UBERON:0005173!7.89e-09!55;UBERON:0002113!2.20e-08!27;UBERON:0003918!2.20e-08!27;UBERON:0005095!2.20e-08!27;UBERON:0007687!2.20e-08!27;UBERON:0000489!5.77e-08!32;UBERON:0002417!6.14e-08!61;UBERON:0000916!6.14e-08!61;UBERON:0000080!1.53e-07!18;UBERON:0002120!1.53e-07!18;UBERON:0004875!1.53e-07!18;UBERON:0005721!1.53e-07!18;UBERON:0005754!1.53e-07!18;UBERON:0007297!1.53e-07!18;UBERON:0006555!3.46e-07!17;UBERON:0005103!3.46e-07!17;UBERON:0000083!3.46e-07!17;UBERON:0009201!3.46e-07!17;UBERON:0004819!3.46e-07!17;UBERON:0006553!3.46e-07!17;UBERON:0003074!3.46e-07!17;UBERON:0003060!3.46e-07!17;UBERON:0000924!3.68e-07!173;UBERON:0006601!3.68e-07!173;UBERON:0003887!5.95e-07!21;UBERON:0005631!6.66e-07!14;UBERON:0000158!6.66e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.82e-08;24!UBERON:0011143;1.82e-08;24!UBERON:0000478;4.02e-08;24!UBERON:0006555;5.35e-08;15!UBERON:0004819;5.35e-08;15!UBERON:0001285;5.35e-08;15!UBERON:0007684;5.35e-08;15!UBERON:0000489;6.56e-08;29!UBERON:0001225;2.25e-07;12!UBERON:0008987;2.25e-07;12!UBERON:0006554;4.16e-07;30!UBERON:0001008;4.16e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,8.48e-11,54;UBERON:0005173,8.48e-11,54;UBERON:0002417,4.25e-10,60;UBERON:0000916,4.25e-10,60;UBERON:0002113,7.48e-10,26;UBERON:0003918,7.48e-10,26;UBERON:0011143,7.48e-10,26;UBERON:0005095,7.48e-10,26;UBERON:0007687,7.48e-10,26;UBERON:0005631,1.22e-09,14;UBERON:0000158,1.22e-09,14;UBERON:0000489,3.34e-09,31;UBERON:0006555,7.58e-09,16;UBERON:0004819,7.58e-09,16;UBERON:0000478,2.08e-08,24;UBERON:0004211,4.65e-08,15;UBERON:0009773,4.65e-08,15;UBERON:0001231,4.65e-08,15;UBERON:0001285,4.65e-08,15;UBERON:0007684,4.65e-08,15;UBERON:0004208,4.65e-08,15;UBERON:0009569,7.15e-08,112;UBERON:0006554,9.37e-08,47;UBERON:0003124,1.89e-07,7;UBERON:0001225,1.93e-07,12;UBERON:0008987,1.93e-07,12;UBERON:0001008,2.10e-07,48;UBERON:0005177,3.35e-07,101 | |||
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| ||
|short_description=p4@SLC5A6 | |short_description=p4@SLC5A6 | ||
}} | }} |
Latest revision as of 16:20, 16 September 2015
Short description: | p4@SLC5A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC5A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000401463_5end |
EntrezGene: | SLC5A6 |
HGNC: | 11041 |
UniProt: | E7EW78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 4.65e-08 | 15 |
epithelial cell | 1.56e-07 | 253 |
kidney cortical cell | 1.93e-07 | 12 |
renal cortical epithelial cell | 1.93e-07 | 12 |
kidney cell | 2.13e-07 | 17 |
kidney epithelial cell | 2.13e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 8.48e-11 | 54 |
abdominal segment element | 8.48e-11 | 54 |
abdominal segment of trunk | 4.25e-10 | 60 |
abdomen | 4.25e-10 | 60 |
kidney | 7.48e-10 | 26 |
kidney mesenchyme | 7.48e-10 | 26 |
upper urinary tract | 7.48e-10 | 26 |
kidney rudiment | 7.48e-10 | 26 |
kidney field | 7.48e-10 | 26 |
extraembryonic membrane | 1.22e-09 | 14 |
membranous layer | 1.22e-09 | 14 |
cavitated compound organ | 3.34e-09 | 31 |
excretory tube | 7.58e-09 | 16 |
kidney epithelium | 7.58e-09 | 16 |
extraembryonic structure | 2.08e-08 | 24 |
nephron epithelium | 4.65e-08 | 15 |
renal tubule | 4.65e-08 | 15 |
nephron tubule | 4.65e-08 | 15 |
nephron | 4.65e-08 | 15 |
uriniferous tubule | 4.65e-08 | 15 |
nephrogenic mesenchyme | 4.65e-08 | 15 |
subdivision of trunk | 7.15e-08 | 112 |
urinary system structure | 9.37e-08 | 47 |
chorion | 1.89e-07 | 7 |
cortex of kidney | 1.93e-07 | 12 |
renal parenchyma | 1.93e-07 | 12 |
renal system | 2.10e-07 | 48 |
trunk region element | 3.35e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.33e-10 | 22 |
germ cell cancer | 3.33e-10 | 22 |
cell type cancer | 3.53e-07 | 143 |