FFCP PHASE1:Hg19::chr5:160365587..160365598,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285629 | |EntrezGene=285629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000518301,ENST00000518580,NR_027111,uc003lyq.1_5end | |association_with_transcript=34bp_to_ENST00000518301,ENST00000518580,NR_027111,uc003lyq.1_5end | ||
|cluster_id=chr5:160365587..160365598,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_2_at_LOC285629_5end | |description=CAGE_peak_2_at_LOC285629_5end | ||
|id=chr5:160365587..160365598,- | |id=chr5:160365587..160365598,- | ||
|ontology_enrichment_celltype=CL:0000159!6.40e-12!2;CL:0005020!9.82e-09!6;CL:0002138!9.82e-09!6;CL:0005022!9.82e-09!6;CL:0002144!2.67e-08!3;CL:0002586!5.04e-08!3;CL:0000066!1.88e-07!254;CL:0002553!6.59e-07!1;CL:0000319!6.96e-07!1 | |ontology_enrichment_celltype=CL:0000159!6.40e-12!2;CL:0005020!9.82e-09!6;CL:0002138!9.82e-09!6;CL:0005022!9.82e-09!6;CL:0002144!2.67e-08!3;CL:0002586!5.04e-08!3;CL:0000066!1.88e-07!254;CL:0002553!6.59e-07!1;CL:0000319!6.96e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002144;3.27e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,3.27e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3 | |||
|ontology_enrichment_disease=DOID:3030!6.96e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!2.50e-10!5;UBERON:0005388!2.50e-10!5;UBERON:0001802!2.50e-10!5;UBERON:0002465!1.23e-08!10;UBERON:0001915!2.67e-08!3;UBERON:0001982!2.67e-08!3;UBERON:0001042!3.06e-08!10;UBERON:0009145!3.06e-08!10;UBERON:0001781!5.04e-08!3;UBERON:0001782!5.04e-08!3;UBERON:0005424!5.04e-08!3;UBERON:0006562!1.69e-07!11;UBERON:0001896!2.11e-07!3;UBERON:0005290!2.11e-07!3;UBERON:0010096!2.11e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;3.27e-23;3!UBERON:0001915;3.27e-23;3!UBERON:0001982;3.27e-23;3!UBERON:0002394;1.03e-17;4!UBERON:0003928;1.03e-17;4!UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0002294;9.89e-11;7!UBERON:0001173;9.89e-11;7!UBERON:0000058;6.56e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,3.27e-23,3;UBERON:0001915,3.27e-23,3;UBERON:0001982,3.27e-23,3;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0002394,2.74e-12,6;UBERON:0003928,2.74e-12,6;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9 | |||
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|short_description=p2@LOC285629 | |short_description=p2@LOC285629 | ||
}} | }} |
Latest revision as of 16:48, 16 September 2015
Short description: | p2@LOC285629 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC285629_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 34bp_to_ENST00000518301, ENST00000518580, NR_027111, uc003lyq.1_5end |
EntrezGene: | LOC285629 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 3.27e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 3.27e-23 | 3 |
endothelium of capillary | 3.27e-23 | 3 |
capillary | 3.27e-23 | 3 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
bile duct | 2.74e-12 | 6 |
digestive system duct | 2.74e-12 | 6 |
biliary system | 1.21e-08 | 9 |
biliary tree | 1.21e-08 | 9 |
biliary bud | 1.21e-08 | 9 |