FFCP PHASE1:Hg19::chr2:27579623..27579648,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:27579623..27579648,- to FFCP PHASE1:Hg19::chr2:27579623..27579648,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2976 | |EntrezGene=2976 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4665 | |HGNC=4665 | ||
|TSSclassifier=strong | |||
|UniProt=C9JNH7 | |UniProt=C9JNH7 | ||
|association_with_transcript=0bp_to_ENST00000457748_5end | |||
|cluster_id=chr2:27579623..27579648,- | |||
|description=CAGE_peak_1_at_GTF3C2_5end | |||
|id=chr2:27579623..27579648,- | |||
|ontology_enrichment_celltype=CL:0000542!3.84e-12!53;CL:0000051!3.84e-12!53;CL:0000838!1.30e-11!52;CL:0000066!7.41e-09!254;CL:0000945!4.75e-07!24;CL:0000826!4.75e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.80e-07;53!CL:0000945;5.52e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.84e-12,53;CL:0000051,3.84e-12,53;CL:0000838,1.30e-11,52;CL:0000066,4.90e-09,253;CL:0000945,4.75e-07,24;CL:0000826,4.75e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.80e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.94e-26!235;DOID:14566!1.67e-24!239;DOID:0050687!4.68e-19!143;DOID:305!2.02e-16!106;DOID:2531!1.15e-12!51;DOID:0060083!1.15e-12!51;DOID:0050686!2.35e-12!137;DOID:1240!4.53e-10!39;DOID:8692!9.34e-08!31;DOID:3095!4.56e-07!22;DOID:2994!4.56e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.30e-08;39!DOID:2531;3.83e-08;51!DOID:0060083;3.83e-08;51!DOID:8692;1.62e-07;31!DOID:3095;4.66e-07;22!DOID:2994;4.66e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.94e-26,235;DOID:14566,1.67e-24,239;DOID:0050687,4.68e-19,143;DOID:305,2.02e-16,106;DOID:2531,1.15e-12,51;DOID:0060083,1.15e-12,51;DOID:0050686,2.35e-12,137;DOID:1240,4.53e-10,39;DOID:8692,9.34e-08,31;DOID:3095,4.56e-07,22;DOID:2994,4.56e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@GTF3C2 | |||
}} | }} |
Latest revision as of 17:01, 16 September 2015
Short description: | p1@GTF3C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GTF3C2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457748_5end |
EntrezGene: | GTF3C2 |
HGNC: | 4665 |
UniProt: | C9JNH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.84e-12 | 53 |
common lymphoid progenitor | 3.84e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.30e-11 | 52 |
epithelial cell | 4.90e-09 | 253 |
lymphocyte of B lineage | 4.75e-07 | 24 |
pro-B cell | 4.75e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.94e-26 | 235 |
disease of cellular proliferation | 1.67e-24 | 239 |
cell type cancer | 4.68e-19 | 143 |
carcinoma | 2.02e-16 | 106 |
hematologic cancer | 1.15e-12 | 51 |
immune system cancer | 1.15e-12 | 51 |
organ system cancer | 2.35e-12 | 137 |
leukemia | 4.53e-10 | 39 |
myeloid leukemia | 9.34e-08 | 31 |
germ cell and embryonal cancer | 4.56e-07 | 22 |
germ cell cancer | 4.56e-07 | 22 |