FFCP PHASE1:Hg19::chr11:129062287..129062311,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:129062287..129062311,-
|short_description=p16@ARHGAP32
|description=CAGE_peak_16_at_ARHGAP32_5end
|association_with_transcript=-194bp_to_ENST00000310343,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9743 | |EntrezGene=9743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17399 | |HGNC=17399 | ||
|UniProt=A7KAX9, | |TSSclassifier=strong | ||
|UniProt=A7KAX9,C9JQQ7,Q86T64 | |||
|association_with_transcript=-194bp_to_ENST00000310343,ENST00000356092,NM_001142685,uc009zcp.2_5end | |||
|cluster_id=chr11:129062287..129062311,- | |||
|description=CAGE_peak_16_at_ARHGAP32_5end | |||
|id=chr11:129062287..129062311,- | |||
|ontology_enrichment_celltype=CL:0000223!5.58e-09!59;CL:0002076!6.05e-09!43;CL:0000066!1.73e-07!254;CL:0002251!4.81e-07!21;CL:0000083!7.01e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:1000415;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,6.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.65e-16;1 | |||
|ontology_enrichment_disease=DOID:305!8.24e-11!106;DOID:1749!5.11e-09!14;DOID:0050687!7.28e-08!143;DOID:3493!2.81e-07!2;DOID:1793!7.01e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.92e-32;2!DOID:1749;2.23e-10;14!DOID:299;3.15e-10;25!DOID:4929;4.01e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.92e-32,2;DOID:305,1.53e-13,106;DOID:1749,2.46e-10,14;DOID:299,3.08e-10,25;DOID:0050687,8.70e-10,143;DOID:4929,3.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.31e-12!12;UBERON:0002294!4.24e-10!7;UBERON:0001173!4.24e-10!7;UBERON:0004912!4.24e-10!7;UBERON:0004119!2.01e-09!169;UBERON:0000925!2.01e-09!169;UBERON:0006595!2.01e-09!169;UBERON:0002110!9.24e-09!3;UBERON:0006242!9.24e-09!3;UBERON:0003729!1.19e-08!5;UBERON:0001007!2.08e-08!155;UBERON:0001555!2.08e-08!155;UBERON:0007026!2.08e-08!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.90e-20;7!UBERON:0001173;1.90e-20;7!UBERON:0004913;6.47e-17;1!UBERON:0003703;6.47e-17;1!UBERON:0001174;6.47e-17;1!UBERON:0004914;6.47e-17;1!UBERON:0002394;1.53e-16;4!UBERON:0003928;1.53e-16;4!UBERON:0000058;3.65e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,5.53e-17,1;UBERON:0003703,5.53e-17,1;UBERON:0001174,5.53e-17,1;UBERON:0004914,5.53e-17,1;UBERON:0002294,4.90e-16,9;UBERON:0001173,4.90e-16,9;UBERON:0004912,4.90e-16,9;UBERON:0002394,2.36e-11,6;UBERON:0003928,2.36e-11,6 | |||
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| ||
|short_description=p16@ARHGAP32 | |||
}} | }} |
Latest revision as of 17:12, 16 September 2015
Short description: | p16@ARHGAP32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ARHGAP32_5end |
Coexpression cluster: | NA |
Association with transcript: | -194bp_to_ENST00000310343, ENST00000356092, NM_001142685, uc009zcp.2_5end |
EntrezGene: | ARHGAP32 |
HGNC: | 17399 |
UniProt: | A7KAX9C9JQQ7Q86T64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 5.53e-17 | 1 |
extrahepatic bile duct | 5.53e-17 | 1 |
common bile duct | 5.53e-17 | 1 |
duodenal papilla | 5.53e-17 | 1 |
biliary system | 4.90e-16 | 9 |
biliary tree | 4.90e-16 | 9 |
biliary bud | 4.90e-16 | 9 |
bile duct | 2.36e-11 | 6 |
digestive system duct | 2.36e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.92e-32 | 2 |
carcinoma | 1.53e-13 | 106 |
squamous cell carcinoma | 2.46e-10 | 14 |
adenocarcinoma | 3.08e-10 | 25 |
cell type cancer | 8.70e-10 | 143 |
tubular adenocarcinoma | 3.71e-09 | 2 |