FFCP PHASE1:Hg19::chr11:129245526..129245553,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8538 | |EntrezGene=8538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=956 | |HGNC=956 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMQ3 | |UniProt=Q9UMQ3 | ||
|association_with_transcript=-281bp_to_ENST00000281437_5end | |association_with_transcript=-281bp_to_ENST00000281437_5end | ||
|cluster_id=chr11:129245526..129245553,+ | |||
|coexpression_cluster_id=C37 | |coexpression_cluster_id=C37 | ||
|description=CAGE_peak_1_at_BARX2_5end | |description=CAGE_peak_1_at_BARX2_5end | ||
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|ontology_enrichment_celltype=CL:0002076!3.96e-18!43;CL:0000223!4.02e-12!59;CL:0002251!4.35e-11!21;CL:0000066!2.97e-09!254;CL:0002368!4.13e-08!13 | |ontology_enrichment_celltype=CL:0002076!3.96e-18!43;CL:0000223!4.02e-12!59;CL:0002251!4.35e-11!21;CL:0000066!2.97e-09!254;CL:0002368!4.13e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.97e-17;42!CL:0002368;1.93e-12;13!CL:0002251;1.91e-10;20!CL:0002202;3.64e-08;9!CL:0002632;3.64e-08;9!CL:0000622;7.17e-08;5 | |ontology_enrichment_celltype_v019=CL:0002076;1.97e-17;42!CL:0002368;1.93e-12;13!CL:0002251;1.91e-10;20!CL:0002202;3.64e-08;9!CL:0002632;3.64e-08;9!CL:0000622;7.17e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.23e-23,42;CL:0000223,6.29e-17,58;CL:0002368,2.71e-12,13;CL:0002251,2.13e-10,20;CL:0000066,6.24e-10,253;CL:0002202,4.09e-08,9;CL:0002632,4.09e-08,9;CL:0000622,6.46e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000223;7.03e-10;58 | |ontology_enrichment_development_v019=CL:0000223;7.03e-10;58 | ||
|ontology_enrichment_disease=DOID:305!6.20e-09!106;DOID:0050687!8.23e-07!143;DOID:1749!8.43e-07!14 | |ontology_enrichment_disease=DOID:305!6.20e-09!106;DOID:0050687!8.23e-07!143;DOID:1749!8.43e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.73e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.99e-24!115;UBERON:0004119!1.12e-18!169;UBERON:0000925!1.12e-18!169;UBERON:0006595!1.12e-18!169;UBERON:0001007!3.44e-15!155;UBERON:0001555!3.44e-15!155;UBERON:0007026!3.44e-15!155;UBERON:0001004!2.24e-13!72;UBERON:0004921!4.02e-13!129;UBERON:0004185!4.02e-13!129;UBERON:0000161!1.27e-11!35;UBERON:0000077!6.46e-11!130;UBERON:0000062!1.30e-10!511;UBERON:0000481!2.11e-10!347;UBERON:0001049!5.36e-10!57;UBERON:0005068!5.36e-10!57;UBERON:0006241!5.36e-10!57;UBERON:0007135!5.36e-10!57;UBERON:0000922!9.70e-10!612;UBERON:0000166!1.50e-09!21;UBERON:0000475!1.63e-09!365;UBERON:0000468!1.86e-09!659;UBERON:0000153!2.47e-09!129;UBERON:0007811!2.47e-09!129;UBERON:0002050!8.71e-09!605;UBERON:0005423!8.71e-09!605;UBERON:0000924!1.14e-08!173;UBERON:0006601!1.14e-08!173;UBERON:0005181!1.43e-08!35;UBERON:0000923!2.10e-08!604;UBERON:0005291!2.10e-08!604;UBERON:0006598!2.10e-08!604;UBERON:0002532!2.10e-08!604;UBERON:0004121!2.60e-08!169;UBERON:0000033!2.79e-08!123;UBERON:0005178!3.89e-08!34;UBERON:0002224!3.89e-08!34;UBERON:0000065!6.14e-08!53;UBERON:0001041!7.82e-08!98;UBERON:0002616!8.09e-08!59;UBERON:0000467!9.17e-08!625;UBERON:0000480!1.13e-07!626;UBERON:0000464!1.43e-07!104;UBERON:0005911!2.90e-07!82;UBERON:0001044!2.97e-07!6;UBERON:0003293!2.97e-07!6;UBERON:0003294!2.97e-07!6;UBERON:0010047!2.97e-07!6;UBERON:0000167!2.97e-07!6;UBERON:0005153!4.61e-07!37;UBERON:0000165!6.49e-07!28;UBERON:0000930!6.49e-07!28;UBERON:0000064!6.67e-07!219;UBERON:0000915!7.03e-07!52 | |ontology_enrichment_uberon=UBERON:0007023!4.99e-24!115;UBERON:0004119!1.12e-18!169;UBERON:0000925!1.12e-18!169;UBERON:0006595!1.12e-18!169;UBERON:0001007!3.44e-15!155;UBERON:0001555!3.44e-15!155;UBERON:0007026!3.44e-15!155;UBERON:0001004!2.24e-13!72;UBERON:0004921!4.02e-13!129;UBERON:0004185!4.02e-13!129;UBERON:0000161!1.27e-11!35;UBERON:0000077!6.46e-11!130;UBERON:0000062!1.30e-10!511;UBERON:0000481!2.11e-10!347;UBERON:0001049!5.36e-10!57;UBERON:0005068!5.36e-10!57;UBERON:0006241!5.36e-10!57;UBERON:0007135!5.36e-10!57;UBERON:0000922!9.70e-10!612;UBERON:0000166!1.50e-09!21;UBERON:0000475!1.63e-09!365;UBERON:0000468!1.86e-09!659;UBERON:0000153!2.47e-09!129;UBERON:0007811!2.47e-09!129;UBERON:0002050!8.71e-09!605;UBERON:0005423!8.71e-09!605;UBERON:0000924!1.14e-08!173;UBERON:0006601!1.14e-08!173;UBERON:0005181!1.43e-08!35;UBERON:0000923!2.10e-08!604;UBERON:0005291!2.10e-08!604;UBERON:0006598!2.10e-08!604;UBERON:0002532!2.10e-08!604;UBERON:0004121!2.60e-08!169;UBERON:0000033!2.79e-08!123;UBERON:0005178!3.89e-08!34;UBERON:0002224!3.89e-08!34;UBERON:0000065!6.14e-08!53;UBERON:0001041!7.82e-08!98;UBERON:0002616!8.09e-08!59;UBERON:0000467!9.17e-08!625;UBERON:0000480!1.13e-07!626;UBERON:0000464!1.43e-07!104;UBERON:0005911!2.90e-07!82;UBERON:0001044!2.97e-07!6;UBERON:0003293!2.97e-07!6;UBERON:0003294!2.97e-07!6;UBERON:0010047!2.97e-07!6;UBERON:0000167!2.97e-07!6;UBERON:0005153!4.61e-07!37;UBERON:0000165!6.49e-07!28;UBERON:0000930!6.49e-07!28;UBERON:0000064!6.67e-07!219;UBERON:0000915!7.03e-07!52 | ||
|ontology_enrichment_uberon_v019=UBERON:0001041;4.45e-15;14!UBERON:0004921;3.01e-13;33!UBERON:0001044;2.33e-10;6!UBERON:0003293;2.33e-10;6!UBERON:0003294;2.33e-10;6!UBERON:0010047;2.33e-10;6!UBERON:0003408;2.33e-10;6!UBERON:0000167;2.33e-10;6!UBERON:0000165;1.26e-08;28!UBERON:0000161;2.08e-08;19!UBERON:0000166;2.08e-08;19!UBERON:0001555;4.27e-08;54!UBERON:0005178;1.10e-07;34!UBERON:0002224;1.10e-07;34!UBERON:0007196;1.53e-07;15!UBERON:0001558;1.53e-07;15!UBERON:0005181;2.91e-07;35 | |ontology_enrichment_uberon_v019=UBERON:0001041;4.45e-15;14!UBERON:0004921;3.01e-13;33!UBERON:0001044;2.33e-10;6!UBERON:0003293;2.33e-10;6!UBERON:0003294;2.33e-10;6!UBERON:0010047;2.33e-10;6!UBERON:0003408;2.33e-10;6!UBERON:0000167;2.33e-10;6!UBERON:0000165;1.26e-08;28!UBERON:0000161;2.08e-08;19!UBERON:0000166;2.08e-08;19!UBERON:0001555;4.27e-08;54!UBERON:0005178;1.10e-07;34!UBERON:0002224;1.10e-07;34!UBERON:0007196;1.53e-07;15!UBERON:0001558;1.53e-07;15!UBERON:0005181;2.91e-07;35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.22e-17,160;UBERON:0000925,1.22e-17,160;UBERON:0006595,1.22e-17,160;UBERON:0001007,6.73e-15,145;UBERON:0001555,6.73e-15,145;UBERON:0007026,6.73e-15,145;UBERON:0004921,1.58e-14,118;UBERON:0001004,3.53e-12,74;UBERON:0000161,2.16e-11,36;UBERON:0001044,2.07e-10,6;UBERON:0003293,2.07e-10,6;UBERON:0003294,2.07e-10,6;UBERON:0010047,2.07e-10,6;UBERON:0000167,2.07e-10,6;UBERON:0001041,2.60e-10,87;UBERON:0000166,3.24e-10,22;UBERON:0007023,3.35e-09,114;UBERON:0005178,2.09e-08,34;UBERON:0002224,2.09e-08,34;UBERON:0000165,3.62e-08,29;UBERON:0000930,3.62e-08,29;UBERON:0005181,4.80e-08,35;UBERON:0000065,1.55e-07,54;UBERON:0007196,1.69e-07,15;UBERON:0001558,1.69e-07,15;UBERON:0000915,2.90e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7107395916628,7.8313538882345,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.785874452986276,16.3932879731644,18.9100065820059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0378312328371,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,4.09119180886252,0.573609190778008,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,2.63400684980701,5.62008766288098,1.50793458617446,8.33296006426766,0,0,0,0,0,0,0,0,10.2726571734706,4.29243081047436,0,0,0,0,0,0,0.0895585227028483,0.871901815541886,0,0,0,2.69526550203004,2.88239906833923,3.7872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,1.60405176242628,5.89318329189736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,1.66215201785745,0,0,0,0,0,0,0.721287081534056,0,0,7.46545199395024,6.50060246036521,0,0.096670718292122,0,0,0,0,0,0,0.267096106940212,2.14870389969272,1.34533047155574,2.04180339991335,8.59841137272174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04132873447151,9.38423185750102,8.71127878890581,1.22386941009813,0.86101074534246,6.73885902670502,9.31203322427019,0.918893600827838,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.844501632511974,3.78571177677032,1.38141957765574,0,0,0,0,7.90841490096476,2.68531762013414,0,0.394573622547734,0,0,0,0.463840490809256,0,6.2502662660456,0.262379999988587,6.52499617891314,1.0241410345695,7.37335585849022,4.25497827182285,0,0,0,2.65722415744152,0.60298219312704,1.52581736317083,1.43753037910592,0.591095237907095,0.219385397153973,0,11.4327470308455,14.2357978232025,0,0,0.628303510868405,0.760531603454056,0.31900115973192,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,0.326465616318295,0.424059214301822,0,0.995261931078505,7.07660516026713,1.83309043480088,46.8503383315383,44.483018020741,37.8007457209748,0.539209063845416,0.802577647298789,0,0,13.8921879441784,16.2662854287842,0.789168805698781,1.20990716048664,0,0,4.66002600184927,5.4954741440541,0,0,0.313932918407225,0,0,4.2989148634073,0,11.1711333052391,0,2.09672001890436,0,0,0,0,76.7183120423398,0,20.1122859294674,0,0,0.633107959558787,12.3197371122926,0.160317640503067,8.96502577905281,40.7611603547546,2.73771792592801,0,0,1.4405479798815,0,15.7915003193253,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,4.5926170114768,0,0,0.201550417460179,0,0,0,0,0,0,0,0,1.0896272488926,0.160753148465019,0,0,1.349843349309,13.1546332274851,0.668245123238271,0.335434687599266,2.83700546277113,0.629455057619977,1.5840050477911,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.646414781807753,0.52893040697076,0,4.22889013390003,0.533937062838473,0.314408610199332,0,0,0,0,12.7668251554036,0,0,0,0,0.314108192500469,0,0.854183854313742,0.250381861413,4.58727356552057,4.43716206147409,2.42175971471395,0.138348634936231,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.553033744606923,0,0.132864840313363,0,0,0,0.633936370075881,5.59964708393804,0,0,0,0,11.330240125275,9.33115890049459,0,0.107824811396682,0,0,0,8.715571724169,0.991486114072017,0,0,0.315446980005013,2.40171224485641,0,0,0.706521476061055,0,0.319267718114302,1.02558182120378,0,0.207471757392654,0.161475645631851,0,4.2203518955441,0.235939446695481,6.05314375121541,0.808679663052368,0,6.90359926060101,0,1.35378591028663,0,10.9411961572633,0,0.163771917510097,4.43568258651136,0.270150338473579,0,0,0.317079050969534,0.546974809018219,168.315134425155,17.8636024220146,0,16.098065882589,0,0.672567444437648,0.606965604236632,0.91064876540519,1.50794029276486,0,0,0.679697329768317,0.394636641377094,0.945550727071746,0.333694205676207,2.04082041411336,0,21.300684411848,0,7.77339328387037,11.9437921971763,0.142953088353313,0,0,0.695433089210318,0,9.11751122317362,1.7071847709395,8.2951159417691,175.102535039853,0,0,1.27016115057279,2.7492824225286,0,0,0,1.27595303699816,77.1740465137765,1.29485767437579,1.64260490969995,0,28.1712375974301,0,0.198950775161368,0,0.11294608203896,0,31.2493086183014,10.0326405540328,0.437119121007915,0,0,1.64973582971138,1.37415926980462,2.37637120261669,0,0,0,0,0,3.39252483350749,0,0.0802413666891683,2.19100916473955,112.84740371751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| ||
|short_description=p1@BARX2 | |short_description=p1@BARX2 | ||
}} | }} |
Latest revision as of 17:23, 16 September 2015
Short description: | p1@BARX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BARX2_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -281bp_to_ENST00000281437_5end |
EntrezGene: | BARX2 |
HGNC: | 956 |
UniProt: | Q9UMQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.23e-23 | 42 |
endodermal cell | 6.29e-17 | 58 |
respiratory epithelial cell | 2.71e-12 | 13 |
epithelial cell of alimentary canal | 2.13e-10 | 20 |
epithelial cell | 6.24e-10 | 253 |
epithelial cell of tracheobronchial tree | 4.09e-08 | 9 |
epithelial cell of lower respiratory tract | 4.09e-08 | 9 |
acinar cell | 6.46e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.22e-17 | 160 |
endoderm | 1.22e-17 | 160 |
presumptive endoderm | 1.22e-17 | 160 |
digestive system | 6.73e-15 | 145 |
digestive tract | 6.73e-15 | 145 |
primitive gut | 6.73e-15 | 145 |
subdivision of digestive tract | 1.58e-14 | 118 |
respiratory system | 3.53e-12 | 74 |
orifice | 2.16e-11 | 36 |
saliva-secreting gland | 2.07e-10 | 6 |
gland of oral region | 2.07e-10 | 6 |
gland of foregut | 2.07e-10 | 6 |
oral gland | 2.07e-10 | 6 |
oral cavity | 2.07e-10 | 6 |
foregut | 2.60e-10 | 87 |
oral opening | 3.24e-10 | 22 |
adult organism | 3.35e-09 | 114 |
thoracic cavity element | 2.09e-08 | 34 |
thoracic cavity | 2.09e-08 | 34 |
mouth | 3.62e-08 | 29 |
stomodeum | 3.62e-08 | 29 |
thoracic segment organ | 4.80e-08 | 35 |
respiratory tract | 1.55e-07 | 54 |
tracheobronchial tree | 1.69e-07 | 15 |
lower respiratory tract | 1.69e-07 | 15 |
thoracic segment of trunk | 2.90e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.73e-07 | 106 |