FFCP PHASE1:Hg19::chr11:129245736..129245758,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8538 | |EntrezGene=8538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=956 | |HGNC=956 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMQ3 | |UniProt=Q9UMQ3 | ||
|association_with_transcript=-76bp_to_ENST00000281437_5end | |association_with_transcript=-76bp_to_ENST00000281437_5end | ||
|cluster_id=chr11:129245736..129245758,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_2_at_BARX2_5end | |description=CAGE_peak_2_at_BARX2_5end | ||
|id=chr11:129245736..129245758,+ | |id=chr11:129245736..129245758,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.59e-17!43;CL:0000223!1.36e-14!59;CL:0000066!1.58e-11!254;CL:0002368!2.13e-09!13;CL:0002251!1.14e-08!21 | |ontology_enrichment_celltype=CL:0002076!1.59e-17!43;CL:0000223!1.36e-14!59;CL:0000066!1.58e-11!254;CL:0002368!2.13e-09!13;CL:0002251!1.14e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0000622;2.84e-09;5!CL:0000154;9.91e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.54e-09,5;CL:0000154,9.05e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.70e-07!106 | |ontology_enrichment_disease=DOID:305!2.70e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4074;5.72e-07;2!DOID:4905;5.72e-07;2!DOID:3498;5.72e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,6.26e-07,2;DOID:4905,6.26e-07,2;DOID:3498,6.26e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.24e-15!169;UBERON:0000925!2.24e-15!169;UBERON:0006595!2.24e-15!169;UBERON:0001007!1.39e-12!155;UBERON:0001555!1.39e-12!155;UBERON:0007026!1.39e-12!155;UBERON:0007023!8.75e-12!115;UBERON:0000161!8.52e-11!35;UBERON:0004921!2.76e-10!129;UBERON:0004185!2.76e-10!129;UBERON:0000077!1.83e-09!130;UBERON:0001004!2.36e-09!72;UBERON:0000166!1.38e-08!21;UBERON:0002298!4.06e-08!8;UBERON:0000475!7.38e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;4.82e-13;14!UBERON:0001044;8.90e-13;6!UBERON:0003293;8.90e-13;6!UBERON:0003294;8.90e-13;6!UBERON:0010047;8.90e-13;6!UBERON:0003408;8.90e-13;6!UBERON:0000167;8.90e-13;6!UBERON:0004921;2.47e-10;33!UBERON:0001829;1.29e-07;2!UBERON:0006562;1.73e-07;2!UBERON:0000165;3.12e-07;28!UBERON:0000341;3.39e-07;2!UBERON:0000161;6.98e-07;19!UBERON:0000166;6.98e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,8.60e-13,6;UBERON:0003293,8.60e-13,6;UBERON:0003294,8.60e-13,6;UBERON:0010047,8.60e-13,6;UBERON:0000167,8.60e-13,6;UBERON:0000166,9.72e-10,22;UBERON:0001041,1.53e-09,87;UBERON:0004921,5.92e-09,118;UBERON:0001007,1.13e-07,145;UBERON:0001555,1.13e-07,145;UBERON:0007026,1.13e-07,145;UBERON:0001829,1.37e-07,2;UBERON:0003408,1.67e-07,10;UBERON:0000341,3.66e-07,2;UBERON:0004119,4.66e-07,160;UBERON:0000925,4.66e-07,160;UBERON:0006595,4.66e-07,160;UBERON:0000165,5.85e-07,29;UBERON:0000930,5.85e-07,29 | |||
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| ||
|short_description=p2@BARX2 | |short_description=p2@BARX2 | ||
}} | }} |
Latest revision as of 17:25, 16 September 2015
Short description: | p2@BARX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BARX2_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -76bp_to_ENST00000281437_5end |
EntrezGene: | BARX2 |
HGNC: | 956 |
UniProt: | Q9UMQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.54e-09 | 5 |
protein secreting cell | 9.05e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 8.60e-13 | 6 |
gland of oral region | 8.60e-13 | 6 |
gland of foregut | 8.60e-13 | 6 |
oral gland | 8.60e-13 | 6 |
oral cavity | 8.60e-13 | 6 |
oral opening | 9.72e-10 | 22 |
foregut | 1.53e-09 | 87 |
subdivision of digestive tract | 5.92e-09 | 118 |
digestive system | 1.13e-07 | 145 |
digestive tract | 1.13e-07 | 145 |
primitive gut | 1.13e-07 | 145 |
major salivary gland | 1.37e-07 | 2 |
gland of gut | 1.67e-07 | 10 |
throat | 3.66e-07 | 2 |
endoderm-derived structure | 4.66e-07 | 160 |
endoderm | 4.66e-07 | 160 |
presumptive endoderm | 4.66e-07 | 160 |
mouth | 5.85e-07 | 29 |
stomodeum | 5.85e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 6.26e-07 | 2 |
pancreatic carcinoma | 6.26e-07 | 2 |
pancreatic ductal adenocarcinoma | 6.26e-07 | 2 |