FFCP PHASE1:Hg19::chr5:16179713..16179724,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441061 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33609 | |||
|TSSclassifier=strong | |||
|UniProt=A6NNE9 | |||
|association_with_transcript=172bp_to_NM_001102562,uc003jfo.2_5end | |||
|cluster_id=chr5:16179713..16179724,- | |||
|coexpression_cluster_id=C4389 | |||
|description=CAGE_peak_4_at_MARCH11_5end | |||
|id=chr5:16179713..16179724,- | |||
|ontology_enrichment_celltype=CL:0002553!7.90e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.24e-51;5!CL:0002553;9.99e-30;1!CL:0002321;1.10e-17;15!CL:0000082;5.34e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,9.99e-30,1;CL:0000082,5.34e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.64e-29;1 | |||
|ontology_enrichment_disease=DOID:169!1.03e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;7.48e-43;6!DOID:171;4.28e-26;10!DOID:3095;2.64e-12;22!DOID:2994;2.64e-12;22!DOID:1324;1.27e-08;15!DOID:5409;1.70e-08;4!DOID:0050615;3.83e-08;16!DOID:4362;6.58e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.48e-43,6;DOID:171,4.28e-26,10;DOID:3095,2.64e-12,22;DOID:2994,2.64e-12,22;DOID:1324,1.27e-08,15;DOID:5409,1.70e-08,4;DOID:0050615,3.83e-08,16;DOID:4362,6.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.87e-30!57;UBERON:0005068!8.87e-30!57;UBERON:0006241!8.87e-30!57;UBERON:0007135!8.87e-30!57;UBERON:0000073!2.64e-29!94;UBERON:0001016!2.64e-29!94;UBERON:0002616!1.23e-28!59;UBERON:0001017!3.59e-26!82;UBERON:0000955!4.41e-26!69;UBERON:0006238!4.41e-26!69;UBERON:0005743!9.54e-25!86;UBERON:0003075!1.78e-20!86;UBERON:0007284!1.78e-20!86;UBERON:0002780!2.87e-20!41;UBERON:0001890!2.87e-20!41;UBERON:0006240!2.87e-20!41;UBERON:0003080!9.99e-20!42;UBERON:0002346!2.27e-19!90;UBERON:0001950!9.71e-18!20;UBERON:0007023!1.15e-17!115;UBERON:0004121!6.53e-17!169;UBERON:0002021!1.24e-16!5;UBERON:0000924!2.17e-16!173;UBERON:0006601!2.17e-16!173;UBERON:0002619!4.60e-16!22;UBERON:0001869!5.36e-16!32;UBERON:0000033!6.74e-16!123;UBERON:0001893!5.81e-15!34;UBERON:0002020!5.89e-15!34;UBERON:0003528!5.89e-15!34;UBERON:0000153!6.16e-15!129;UBERON:0007811!6.16e-15!129;UBERON:0004733!2.09e-14!12;UBERON:0002028!2.09e-14!12;UBERON:0007277!2.09e-14!12;UBERON:0000956!4.93e-14!25;UBERON:0000203!4.93e-14!25;UBERON:0004732!2.95e-13!13;UBERON:0003056!8.98e-13!61;UBERON:0002791!9.51e-13!33;UBERON:0003076!2.05e-11!15;UBERON:0003057!2.05e-11!15;UBERON:0000013!2.24e-10!5;UBERON:0002410!2.24e-10!5;UBERON:0002298!5.24e-10!8;UBERON:0002680!5.33e-09!9;UBERON:0001895!5.33e-09!9;UBERON:0010092!5.33e-09!9;UBERON:0000025!1.54e-08!194;UBERON:0000200!5.48e-08!6;UBERON:0001896!1.25e-07!3;UBERON:0005290!1.25e-07!3;UBERON:0010096!1.25e-07!3;UBERON:0000988!2.50e-07!3;UBERON:0001894!3.31e-07!7;UBERON:0006222!3.31e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;3.24e-51;5!UBERON:0002410;3.24e-51;5!UBERON:0000010;6.82e-29;8!UBERON:0004802;5.34e-07;19!UBERON:0000115;5.34e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.24e-51,5;UBERON:0002410,3.24e-51,5;UBERON:0000010,6.82e-29,8;UBERON:0004802,5.34e-07,19;UBERON:0000115,5.34e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34366944973453,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04630994085843,4.52864207866064,0,2.51182167841632,0,0,0,0,0,0,5.60399523799829,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.504143392443436,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63757624423474,0,0,0,0,8.30295639616704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0.250707539292375,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@MARCH11 | |||
}} |
Latest revision as of 17:51, 16 September 2015
Short description: | p4@MARCH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MARCH11_5end |
Coexpression cluster: | C4389_small_neuroblastoma_nonsmall_heart_cerebellum_medulloblastoma_temporal |
Association with transcript: | 172bp_to_NM_001102562, uc003jfo.2_5end |
EntrezGene: | MARCH11 |
HGNC: | 33609 |
UniProt: | A6NNE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 9.99e-30 | 1 |
epithelial cell of lung | 5.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.24e-51 | 5 |
autonomic nervous system | 3.24e-51 | 5 |
peripheral nervous system | 6.82e-29 | 8 |
respiratory tract epithelium | 5.34e-07 | 19 |
lung epithelium | 5.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.48e-43 | 6 |
neuroectodermal tumor | 4.28e-26 | 10 |
germ cell and embryonal cancer | 2.64e-12 | 22 |
germ cell cancer | 2.64e-12 | 22 |
lung cancer | 1.27e-08 | 15 |
lung small cell carcinoma | 1.70e-08 | 4 |
respiratory system cancer | 3.83e-08 | 16 |
cervical cancer | 6.39e-07 | 5 |