FFCP PHASE1:Hg19::chr8:140614315..140614330,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:140614315..140614330,-
|short_description=p2@KCNK9
|description=CAGE_peak_2_at_KCNK9_5end
|association_with_transcript=-8bp_to_ENST00000523653_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51305 | |EntrezGene=51305 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6283 | |HGNC=6283 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000523653_5end | |||
|cluster_id=chr8:140614315..140614330,- | |||
|coexpression_cluster_id=C116 | |||
|description=CAGE_peak_2_at_KCNK9_5end | |||
|id=chr8:140614315..140614330,- | |||
|ontology_enrichment_celltype=CL:1000507!7.83e-09!12;CL:1000494!7.83e-09!12;CL:1000497!4.99e-08!18;CL:0002518!4.99e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.04e-16;10!CL:1000494;1.04e-16;10!CL:1000449;2.30e-11;15!CL:1000497;4.22e-10;17!CL:0002518;4.22e-10;17!CL:0000239;2.88e-07;3!CL:1000615;2.88e-07;3!CL:0002306;2.88e-07;3!CL:0002681;6.74e-07;12!CL:0002584;6.74e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,8.57e-17,10;CL:1000494,8.57e-17,10;CL:1000449,2.03e-11,15;CL:1000497,3.78e-10,17;CL:0002518,3.78e-10,17;CL:0000239,2.97e-07,3;CL:1000615,2.97e-07,3;CL:0002306,2.97e-07,3;CL:0002681,6.35e-07,12;CL:0002584,6.35e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!1.89e-10!14;DOID:299!3.89e-09!25;DOID:4929!6.24e-09!2;DOID:162!1.64e-08!235;DOID:14566!3.39e-08!239;DOID:0050686!2.90e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:4960;8.94e-20;1!DOID:0070004;8.94e-20;1!DOID:12603;1.42e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,8.95e-20,1;DOID:0070004,8.95e-20,1;DOID:12603,1.30e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0009773!7.83e-09!12;UBERON:0001231!7.83e-09!12;UBERON:0004810!7.83e-09!12;UBERON:0002113!9.10e-07!27;UBERON:0003918!9.10e-07!27;UBERON:0005095!9.10e-07!27;UBERON:0007687!9.10e-07!27;UBERON:0003887!9.20e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.04e-16;10!UBERON:0009773;1.04e-16;10!UBERON:0001231;1.04e-16;10!UBERON:0004810;1.04e-16;10!UBERON:0006555;2.30e-11;15!UBERON:0004819;2.30e-11;15!UBERON:0001285;2.30e-11;15!UBERON:0007684;2.30e-11;15!UBERON:0002113;2.54e-07;24!UBERON:0011143;2.54e-07;24!UBERON:0006853;2.88e-07;3!UBERON:0007685;2.88e-07;3!UBERON:0004134;2.88e-07;3!UBERON:0001225;6.74e-07;12!UBERON:0008987;6.74e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,8.57e-17,10;UBERON:0004211,2.03e-11,15;UBERON:0009773,2.03e-11,15;UBERON:0001231,2.03e-11,15;UBERON:0001285,2.03e-11,15;UBERON:0007684,2.03e-11,15;UBERON:0004208,2.03e-11,15;UBERON:0006555,9.59e-11,16;UBERON:0004819,9.59e-11,16;UBERON:0006853,2.97e-07,3;UBERON:0007685,2.97e-07,3;UBERON:0004134,2.97e-07,3;UBERON:0001225,6.35e-07,12;UBERON:0008987,6.35e-07,12;UBERON:0002113,7.88e-07,26;UBERON:0003918,7.88e-07,26;UBERON:0011143,7.88e-07,26;UBERON:0005095,7.88e-07,26;UBERON:0007687,7.88e-07,26 | |||
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| ||
|short_description=p2@KCNK9 | |||
}} | }} |
Latest revision as of 18:49, 16 September 2015
Short description: | p2@KCNK9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNK9_5end |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | -8bp_to_ENST00000523653_5end |
EntrezGene: | KCNK9 |
HGNC: | 6283 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 8.57e-17 | 10 |
nephron tubule epithelial cell | 8.57e-17 | 10 |
epithelial cell of nephron | 2.03e-11 | 15 |
kidney cell | 3.78e-10 | 17 |
kidney epithelial cell | 3.78e-10 | 17 |
brush border epithelial cell | 2.97e-07 | 3 |
kidney cortex tubule cell | 2.97e-07 | 3 |
epithelial cell of proximal tubule | 2.97e-07 | 3 |
kidney cortical cell | 6.35e-07 | 12 |
renal cortical epithelial cell | 6.35e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 8.57e-17 | 10 |
nephron epithelium | 2.03e-11 | 15 |
renal tubule | 2.03e-11 | 15 |
nephron tubule | 2.03e-11 | 15 |
nephron | 2.03e-11 | 15 |
uriniferous tubule | 2.03e-11 | 15 |
nephrogenic mesenchyme | 2.03e-11 | 15 |
excretory tube | 9.59e-11 | 16 |
kidney epithelium | 9.59e-11 | 16 |
renal cortex tubule | 2.97e-07 | 3 |
region of nephron tubule | 2.97e-07 | 3 |
proximal tubule | 2.97e-07 | 3 |
cortex of kidney | 6.35e-07 | 12 |
renal parenchyma | 6.35e-07 | 12 |
kidney | 7.88e-07 | 26 |
kidney mesenchyme | 7.88e-07 | 26 |
upper urinary tract | 7.88e-07 | 26 |
kidney rudiment | 7.88e-07 | 26 |
kidney field | 7.88e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 8.95e-20 | 1 |
myeloma | 8.95e-20 | 1 |
acute leukemia | 1.30e-19 | 1 |