FFCP PHASE1:Hg19::chr13:21634421..21634448,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26524 | |EntrezGene=26524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6515 | |HGNC=6515 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000542899,uc009zzs.2_5end | |association_with_transcript=0bp_to_ENST00000542899,uc009zzs.2_5end | ||
|cluster_id=chr13:21634421..21634448,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_6_at_LATS2_5end | |description=CAGE_peak_6_at_LATS2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002598!3.34e-08!1 | |ontology_enrichment_celltype=CL:0002598!3.34e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.03e-17;3!CL:1000428;1.03e-17;3!CL:0002559;3.42e-11;5 | |ontology_enrichment_celltype_v019=CL:0000346;1.03e-17;3!CL:1000428;1.03e-17;3!CL:0002559;3.42e-11;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,9.46e-18,3;CL:1000428,9.46e-18,3;CL:0002559,3.26e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | ||
|ontology_enrichment_disease=DOID:3371!2.19e-08!1;DOID:4549!2.19e-08!1;DOID:5861!2.19e-08!1;DOID:6496!2.19e-08!1;DOID:6193!5.05e-08!1 | |ontology_enrichment_disease=DOID:3371!2.19e-08!1;DOID:4549!2.19e-08!1;DOID:5861!2.19e-08!1;DOID:6496!2.19e-08!1;DOID:6193!5.05e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000029!2.35e-08!1;UBERON:0000473!2.72e-08!8 | |ontology_enrichment_uberon=UBERON:0000029!2.35e-08!1;UBERON:0000473!2.72e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000412;1.03e-17;3!UBERON:0001992;1.03e-17;3!UBERON:0002073;3.42e-11;5!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0002067;8.61e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000412;1.03e-17;3!UBERON:0001992;1.03e-17;3!UBERON:0002073;3.42e-11;5!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0002067;8.61e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000412,9.46e-18,3;UBERON:0001992,9.46e-18,3;UBERON:0002073,3.26e-11,5;UBERON:0005086,3.26e-11,5;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0002067,8.37e-07,9;UBERON:0004016,8.37e-07,9;UBERON:0010083,8.37e-07,9 | |||
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|short_description=p6@LATS2 | |short_description=p6@LATS2 | ||
}} | }} |
Latest revision as of 19:34, 16 September 2015
Short description: | p6@LATS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LATS2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000542899, uc009zzs.2_5end |
EntrezGene: | LATS2 |
HGNC: | 6515 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 9.46e-18 | 3 |
stem cell of epidermis | 9.46e-18 | 3 |
hair follicle cell | 3.26e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
dermal papilla | 9.46e-18 | 3 |
papillary layer of dermis | 9.46e-18 | 3 |
hair follicle | 3.26e-11 | 5 |
hair follicle placode | 3.26e-11 | 5 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
dermis | 8.37e-07 | 9 |
dermatome | 8.37e-07 | 9 |
future dermis | 8.37e-07 | 9 |