FFCP PHASE1:Hg19::chr10:123779213..123779230,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10579 | |EntrezGene=10579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11523 | |HGNC=11523 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_ENST00000489754_5end | |association_with_transcript=-32bp_to_ENST00000489754_5end | ||
|cluster_id=chr10:123779213..123779230,+ | |||
|coexpression_cluster_id=C2040 | |coexpression_cluster_id=C2040 | ||
|description=CAGE_peak_34_at_TACC2_5end | |description=CAGE_peak_34_at_TACC2_5end | ||
|id=chr10:123779213..123779230,+ | |id=chr10:123779213..123779230,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.28e-07!43 | |ontology_enrichment_celltype=CL:0002076!4.28e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.88e-21;2!CL:0001016;1.88e-21;2!CL:0000453;3.82e-09;5!CL:0000840;9.26e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.08e-21,2;CL:0001016,2.08e-21,2;CL:0000453,3.98e-09,5;CL:0000840,9.58e-08,5;CL:0001029,9.58e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.37e-11;1!UBERON:0009143;1.97e-11;1!UBERON:0006298;3.81e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;1.37e-11;1!DOID:1357;1.37e-11;1!DOID:178;3.81e-11;1!DOID:326;3.81e-11;1!DOID:3978;3.81e-11;1!DOID:3394;3.81e-11;1!DOID:5844;3.81e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.18e-11,1;DOID:1357,1.18e-11,1;DOID:178,4.44e-11,1;DOID:326,4.44e-11,1;DOID:3978,4.44e-11,1;DOID:3394,4.44e-11,1;DOID:5844,4.44e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0003408!1.50e-11!10;UBERON:0001044!9.21e-11!6;UBERON:0003293!9.21e-11!6;UBERON:0003294!9.21e-11!6;UBERON:0010047!9.21e-11!6;UBERON:0000167!9.21e-11!6;UBERON:0000161!3.41e-10!35;UBERON:0000166!8.43e-10!21;UBERON:0007023!1.35e-08!115;UBERON:0001007!2.59e-08!155;UBERON:0001555!2.59e-08!155;UBERON:0007026!2.59e-08!155;UBERON:0004119!2.77e-08!169;UBERON:0000925!2.77e-08!169;UBERON:0006595!2.77e-08!169;UBERON:0000974!7.54e-08!10;UBERON:0000078!7.76e-08!18;UBERON:0004921!1.57e-07!129;UBERON:0004185!1.57e-07!129;UBERON:0000165!8.25e-07!28;UBERON:0000930!8.25e-07!28;UBERON:0002530!9.24e-07!59 | |ontology_enrichment_uberon=UBERON:0003408!1.50e-11!10;UBERON:0001044!9.21e-11!6;UBERON:0003293!9.21e-11!6;UBERON:0003294!9.21e-11!6;UBERON:0010047!9.21e-11!6;UBERON:0000167!9.21e-11!6;UBERON:0000161!3.41e-10!35;UBERON:0000166!8.43e-10!21;UBERON:0007023!1.35e-08!115;UBERON:0001007!2.59e-08!155;UBERON:0001555!2.59e-08!155;UBERON:0007026!2.59e-08!155;UBERON:0004119!2.77e-08!169;UBERON:0000925!2.77e-08!169;UBERON:0006595!2.77e-08!169;UBERON:0000974!7.54e-08!10;UBERON:0000078!7.76e-08!18;UBERON:0004921!1.57e-07!129;UBERON:0004185!1.57e-07!129;UBERON:0000165!8.25e-07!28;UBERON:0000930!8.25e-07!28;UBERON:0002530!9.24e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;5.78e-27;6!UBERON:0003293;5.78e-27;6!UBERON:0003294;5.78e-27;6!UBERON:0010047;5.78e-27;6!UBERON:0003408;5.78e-27;6!UBERON:0000167;5.78e-27;6!UBERON:0001041;2.90e-25;14!UBERON:0001829;5.75e-21;2!UBERON:0000161;4.70e-13;19!UBERON:0000166;4.70e-13;19!UBERON:0001831;1.37e-11;1!UBERON:0001764;1.37e-11;1!UBERON:0001825;1.37e-11;1!UBERON:0001567;1.37e-11;1!UBERON:0004921;2.26e-11;33!UBERON:0002372;3.81e-11;1!UBERON:0001736;3.81e-11;1!UBERON:0001961;3.81e-11;1!UBERON:0001744;3.81e-11;1!UBERON:0001042;3.81e-11;1!UBERON:0001735;3.81e-11;1!UBERON:0000165;8.04e-09;28!UBERON:0002365;6.00e-08;31!UBERON:0002330;6.00e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.50e-27,6;UBERON:0003293,3.50e-27,6;UBERON:0003294,3.50e-27,6;UBERON:0010047,3.50e-27,6;UBERON:0000167,3.50e-27,6;UBERON:0001829,3.47e-21,2;UBERON:0003408,1.96e-16,10;UBERON:0001764,1.18e-11,1;UBERON:0001825,1.18e-11,1;UBERON:0001831,1.31e-11,1;UBERON:0001567,1.31e-11,1;UBERON:0008801,1.31e-11,1;UBERON:0001736,2.42e-11,1;UBERON:0006298,2.42e-11,1;UBERON:0000166,2.45e-11,22;UBERON:0002372,3.63e-11,1;UBERON:0001961,3.63e-11,1;UBERON:0001744,3.63e-11,1;UBERON:0001735,3.63e-11,1;UBERON:0000165,1.44e-08,29;UBERON:0000930,1.44e-08,29;UBERON:0002365,5.50e-08,31;UBERON:0002330,5.50e-08,31;UBERON:0002530,1.42e-07,59;UBERON:0000153,3.05e-07,62;UBERON:0007811,3.05e-07,62;UBERON:0000161,7.18e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.920809889358963,0,0,0,0.902399225814824,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,3.48559360696508,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,2.42472541221049,0,0.451961481561065,0,0,0,0.391102765469606,0,0,0,1.29681375438695,0,0,0,0,3.06402245001834,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,1.16495949527454,0,0,0,0,0.0846733320657845,0,0,0,0,0,2.0247650239635,13.9284351820431,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,2.55336503108073,0,0,0,0,3.92635240625586,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83780436800028,0.496211178389294,0,0,1.60710550763486,0,0,0.227662191351298,0,0,0,0,0,0,0,0.470958557103084,0,0.840816489941367,0,0,0,0.643288897589907,0,0.116241425368125,0,0,0,0.17071847709395,1.38251932362818,6.45341038230416,0,0,0,0.22910686854405,0,0,0,0.196300467230486,0,0,0.205325613712494,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0.470317296361523,0,0.942706188406504,0,0,0,0,0,0,0,0.178553938605658,0,0,0,1.83491713361816,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.509944148709909,4.00826107898341,0.275684698604535,0,0,0,0,0,1.27940389140589,0.476128862927481,0.258355639344024,0.496597714366863,0,0.572824424503484,1.0105859447911,0.653150243690884,0.684466602170562,1.27968900727716,0.932388670104793,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.920809889358963,0,0,0,0.902399225814824,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,3.48559360696508,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,2.42472541221049,0,0.451961481561065,0,0,0,0.391102765469606,0,0,0,1.29681375438695,0,0,0,0,3.06402245001834,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,1.16495949527454,0,0,0,0,0.0846733320657845,0,0,0,0,0,2.0247650239635,13.9284351820431,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,2.55336503108073,0,0,0,0,3.92635240625586,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83780436800028,0.496211178389294,0,0,1.60710550763486,0,0,0.227662191351298,0,0,0,0,0,0,0,0.470958557103084,0,0.840816489941367,0,0,0,0.643288897589907,0,0.116241425368125,0,0,0,0.17071847709395,1.38251932362818,6.45341038230416,0,0,0,0.22910686854405,0,0,0,0.196300467230486,0,0,0.205325613712494,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0,0.470317296361523,0,0.942706188406504,0,0,0,0,0,0,0,0.178553938605658,0,0,0,1.83491713361816,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.509944148709909,4.00826107898341,0.275684698604535,0,0,0,0,0,1.27940389140589,0.476128862927481,0.258355639344024,0.496597714366863,0,0.572824424503484,1.0105859447911,0.653150243690884,0.684466602170562,1.27968900727716,0.932388670104793,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p34@TACC2 | |short_description=p34@TACC2 | ||
}} | }} |
Latest revision as of 19:44, 16 September 2015
Short description: | p34@TACC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_TACC2_5end |
Coexpression cluster: | C2040_immature_salivary_parotid_submaxillary_esophagus_glassy_cervical |
Association with transcript: | -32bp_to_ENST00000489754_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.08e-21 | 2 |
immature CD1a-positive Langerhans cell | 2.08e-21 | 2 |
Langerhans cell | 3.98e-09 | 5 |
immature conventional dendritic cell | 9.58e-08 | 5 |
common dendritic progenitor | 9.58e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 3.50e-27 | 6 |
gland of oral region | 3.50e-27 | 6 |
gland of foregut | 3.50e-27 | 6 |
oral gland | 3.50e-27 | 6 |
oral cavity | 3.50e-27 | 6 |
major salivary gland | 3.47e-21 | 2 |
gland of gut | 1.96e-16 | 10 |
maxillary sinus | 1.18e-11 | 1 |
paranasal sinus | 1.18e-11 | 1 |
parotid gland | 1.31e-11 | 1 |
cheek | 1.31e-11 | 1 |
parotid gland primordium | 1.31e-11 | 1 |
submandibular gland | 2.42e-11 | 1 |
submandibular gland primordium | 2.42e-11 | 1 |
oral opening | 2.45e-11 | 22 |
tonsil | 3.63e-11 | 1 |
mucosa-associated lymphoid tissue | 3.63e-11 | 1 |
lymphoid tissue | 3.63e-11 | 1 |
tonsillar ring | 3.63e-11 | 1 |
mouth | 1.44e-08 | 29 |
stomodeum | 1.44e-08 | 29 |
exocrine gland | 5.50e-08 | 31 |
exocrine system | 5.50e-08 | 31 |
gland | 1.42e-07 | 59 |
anterior region of body | 3.05e-07 | 62 |
craniocervical region | 3.05e-07 | 62 |
orifice | 7.18e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.18e-11 | 1 |
maxillary sinus cancer | 1.18e-11 | 1 |
vascular disease | 4.44e-11 | 1 |
ischemia | 4.44e-11 | 1 |
extrinsic cardiomyopathy | 4.44e-11 | 1 |
myocardial ischemia | 4.44e-11 | 1 |
myocardial infarction | 4.44e-11 | 1 |