FFCP PHASE1:Hg19::chr16:50278603..50278615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:50278603..50278615,+ | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_at_chr16:50278603..50278615,+ | |description=CAGE_peak_at_chr16:50278603..50278615,+ | ||
|id=chr16:50278603..50278615,+ | |id=chr16:50278603..50278615,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.57e-08!43;CL:0000066!1.25e-07!254 | |ontology_enrichment_celltype=CL:0002076!4.57e-08!43;CL:0000066!1.25e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.38e-21;3!CL:0000349;7.27e-17;19!CL:0000575;4.93e-14;2!CL:0000511;7.33e-08;1!CL:0002625;7.33e-08;1!CL:0000216;7.33e-08;1!CL:0002379;7.33e-08;1!CL:0002159;8.31e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.48e-21,3;CL:0000349,6.70e-17,19;CL:0000575,3.31e-14,2;CL:0002379,4.40e-08,1;CL:0000511,6.19e-08,1;CL:0002625,6.19e-08,1;CL:0000216,6.19e-08,1;CL:0002159,7.46e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.70e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;7.33e-08;1!DOID:3565;7.33e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,4.40e-08,1;DOID:3565,4.40e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.11e-12!14;UBERON:0000158!7.11e-12!14;UBERON:0003124!1.26e-10!7;UBERON:0004176!2.32e-09!22;UBERON:0000991!2.36e-08!21;UBERON:0009196!2.36e-08!21;UBERON:0009117!2.36e-08!21;UBERON:0005564!2.36e-08!21;UBERON:0005156!3.65e-07!59;UBERON:0000990!3.65e-07!59;UBERON:0003133!5.04e-07!48;UBERON:0000478!7.78e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.04e-24;10!UBERON:0000158;2.04e-24;10!UBERON:0003124;1.38e-21;3!UBERON:0000920;1.38e-21;3!UBERON:0000478;3.65e-17;24!UBERON:0001723;1.17e-09;3!UBERON:0001033;1.17e-09;3!UBERON:0000305;2.18e-09;7!UBERON:0001136;7.33e-08;1!UBERON:0001343;7.33e-08;1!UBERON:0000997;7.33e-08;1!UBERON:0005056;7.33e-08;1!UBERON:0004910;7.33e-08;1!UBERON:0004176;7.33e-08;1!UBERON:0004813;7.33e-08;1!UBERON:0001987;1.16e-07;4!UBERON:0000964;1.87e-07;4!UBERON:0010409;1.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.81e-30,14;UBERON:0000158,2.81e-30,14;UBERON:0003124,1.66e-24,7;UBERON:0000920,1.48e-21,3;UBERON:0000478,3.39e-17,24;UBERON:0004871,8.36e-14,8;UBERON:0001723,1.22e-09,3;UBERON:0001033,1.22e-09,3;UBERON:0010056,1.22e-09,3;UBERON:0000305,2.18e-09,7;UBERON:0004923,1.09e-08,66;UBERON:0001136,6.19e-08,1;UBERON:0001343,6.19e-08,1;UBERON:0004910,6.19e-08,1;UBERON:0005154,6.19e-08,1;UBERON:0005295,6.19e-08,1;UBERON:0004813,6.19e-08,1;UBERON:0005297,6.19e-08,1;UBERON:0005294,6.19e-08,1;UBERON:0010141,6.19e-08,1;UBERON:0005891,6.19e-08,1;UBERON:0001987,9.97e-08,4;UBERON:0004340,9.97e-08,4;UBERON:0000997,1.06e-07,1;UBERON:0005056,1.06e-07,1;UBERON:0000964,1.54e-07,4;UBERON:0010409,1.54e-07,4;UBERON:0004348,1.54e-07,4;UBERON:0005427,1.54e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0.121973706129595,0.397589304964456,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.548751427043128,2.24803506515239,0.703702806881416,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,2.81201501960331,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0.410635780069046,1.03850885836724,0.464841513839837,0.120859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0.231046011313244,0.784349769176855,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0,0.509752546090077,2.49322802678617,0,0,0,0,0,0,1.33953315142039,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0.145016693914229,0.255679882248303,0.0890320356467374,0.330569830721956,0.384380134730212,0.382838137483752,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0.192444225451024,0,3.26672954583968,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1623345421307,0.593929361665277,6.14321404198464,0,0,0.111308705022906,0.494411622680279,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0,0,0,0,7.65602783356607,2.28993983504656,7.46248686426089,0,0,0,0,0,0,0,0,0,0,0.141353071433941,38.5171778740922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,1.17590876897253,0.34823682632161,0,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0.64127056201227,0.213452994739353,0.19980960958213,0,0,0,0.14405479798815,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,2.32140586367385,0.121499113316049,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88212655758537,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0,0,0,0,0,0.477890301491107,0,0.310525913752519,1.24411862352257,0,0,0,0,0,0.181848659202559,0.322231671127465,0.928067519756987,0,0,0,0,0,0,0,0,0,1.62065732026684,0,0,0.308801447160972,0,0.883445729729405,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0.184105950251841,3.49698769298611,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.588886311006154,0,0.917142992608395,1.84841065840541,0.381382095467167,0,0,1.20336525358812,0.40341013740704,0,0,0,0.739280431085226,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,3.45939243634291,0,0,0.0679697329768317,0,0,0.222462803784138,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0,0.828324005113957,0.681707238073262,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0,0,0,0,0.392616934229891,0,0,0.679708458751268,0,0,0,0,7.76368717774522,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0.253397002022874,0.203977659483963,0.26721740526556,0.735159196278759,0.250707539292375,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0.870866991587845,1.02669990325584,0.134704106029175,0.143444410785353,0.332660356546013,0,0.213454691755431,0,0,0,0.122241444182866,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0.121973706129595,0.397589304964456,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.548751427043128,2.24803506515239,0.703702806881416,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,2.81201501960331,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0.410635780069046,1.03850885836724,0.464841513839837,0.120859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0.231046011313244,0.784349769176855,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0,0.509752546090077,2.49322802678617,0,0,0,0,0,0,1.33953315142039,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0.145016693914229,0.255679882248303,0.0890320356467374,0.330569830721956,0.384380134730212,0.382838137483752,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0.192444225451024,0,3.26672954583968,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1623345421307,0.593929361665277,6.14321404198464,0,0,0.111308705022906,0.494411622680279,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0,0,0,0,7.65602783356607,2.28993983504656,7.46248686426089,0,0,0,0,0,0,0,0,0,0,0.141353071433941,38.5171778740922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,1.17590876897253,0.34823682632161,0,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0.64127056201227,0.213452994739353,0.19980960958213,0,0,0,0.14405479798815,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,2.32140586367385,0.121499113316049,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88212655758537,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0,0,0,0,0,0.477890301491107,0,0.310525913752519,1.24411862352257,0,0,0,0,0,0.181848659202559,0.322231671127465,0.928067519756987,0,0,0,0,0,0,0,0,0,1.62065732026684,0,0,0.308801447160972,0,0.883445729729405,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0.184105950251841,3.49698769298611,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.588886311006154,0,0.917142992608395,1.84841065840541,0.381382095467167,0,0,1.20336525358812,0.40341013740704,0,0,0,0.739280431085226,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,3.45939243634291,0,0,0.0679697329768317,0,0,0.222462803784138,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0,0.828324005113957,0.681707238073262,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0,0,0,0,0.392616934229891,0,0,0.679708458751268,0,0,0,0,7.76368717774522,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0.253397002022874,0.203977659483963,0.26721740526556,0.735159196278759,0.250707539292375,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0.870866991587845,1.02669990325584,0.134704106029175,0.143444410785353,0.332660356546013,0,0.213454691755431,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr16:50278603..50278615,+ | |short_description=p@chr16:50278603..50278615,+ | ||
}} | }} |
Latest revision as of 20:15, 16 September 2015
Short description: | p@chr16:50278603..50278615, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50278603..50278615, + |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.48e-21 | 3 |
extraembryonic cell | 6.70e-17 | 19 |
corneal epithelial cell | 3.31e-14 | 2 |
meningothelial cell | 4.40e-08 | 1 |
androgen binding protein secreting cell | 6.19e-08 | 1 |
seminiferous tubule epithelial cell | 6.19e-08 | 1 |
Sertoli cell | 6.19e-08 | 1 |
general ecto-epithelial cell | 7.46e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.81e-30 | 14 |
membranous layer | 2.81e-30 | 14 |
chorion | 1.66e-24 | 7 |
egg chorion | 1.48e-21 | 3 |
extraembryonic structure | 3.39e-17 | 24 |
somatic layer of lateral plate mesoderm | 8.36e-14 | 8 |
tongue | 1.22e-09 | 3 |
gustatory system | 1.22e-09 | 3 |
future tongue | 1.22e-09 | 3 |
amnion | 2.18e-09 | 7 |
organ component layer | 1.09e-08 | 66 |
mesothelium | 6.19e-08 | 1 |
seminiferous tubule of testis | 6.19e-08 | 1 |
epithelium of male gonad | 6.19e-08 | 1 |
epithelial cord | 6.19e-08 | 1 |
sex cord | 6.19e-08 | 1 |
seminiferous tubule epithelium | 6.19e-08 | 1 |
testis sex cord | 6.19e-08 | 1 |
genital ridge | 6.19e-08 | 1 |
primitive sex cord of indifferent gonad | 6.19e-08 | 1 |
coelomic epithelium | 6.19e-08 | 1 |
placenta | 9.97e-08 | 4 |
allantois | 9.97e-08 | 4 |
mammalian vulva | 1.06e-07 | 1 |
external female genitalia | 1.06e-07 | 1 |
cornea | 1.54e-07 | 4 |
eye surface | 1.54e-07 | 4 |
optic eminence | 1.54e-07 | 4 |
corneal primordium | 1.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.40e-08 | 1 |
meningioma | 4.40e-08 | 1 |