FFCP PHASE1:Hg19::chr5:168272120..168272136,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6586 | |EntrezGene=6586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11087 | |HGNC=11087 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-264bp_to_uc003mac.1_5end | |association_with_transcript=-264bp_to_uc003mac.1_5end | ||
|cluster_id=chr5:168272120..168272136,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_12_at_SLIT3_5end | |description=CAGE_peak_12_at_SLIT3_5end | ||
|id=chr5:168272120..168272136,- | |id=chr5:168272120..168272136,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;6.03e-60;5!CL:0002321;1.20e-20;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.06e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.89e-12;3!UBERON:0003057;2.89e-12;3 | |||
|ontology_enrichment_disease=DOID:114!7.45e-11!2;DOID:169!1.34e-08!6 | |ontology_enrichment_disease=DOID:114!7.45e-11!2;DOID:169!1.34e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:169;3.84e-50;6!DOID:171;1.68e-30;10!DOID:3095;2.38e-14;22!DOID:2994;2.38e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.84e-50,6;DOID:171,1.68e-30,10;DOID:3095,2.38e-14,22;DOID:2994,2.38e-14,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000013;6.03e-60;5!UBERON:0002410;6.03e-60;5!UBERON:0000010;8.87e-34;8!UBERON:0002240;2.89e-12;3!UBERON:0005174;2.89e-12;3!UBERON:0002114;2.89e-12;2!UBERON:0001137;2.89e-12;3!UBERON:0002108;7.01e-08;4 | |||
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|short_description=p12@SLIT3 | |short_description=p12@SLIT3 | ||
}} | }} |
Latest revision as of 20:16, 16 September 2015
Short description: | p12@SLIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLIT3_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -264bp_to_uc003mac.1_5end |
EntrezGene: | SLIT3 |
HGNC: | 11087 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.06e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.03e-60 | 5 |
autonomic nervous system | 6.03e-60 | 5 |
peripheral nervous system | 8.87e-34 | 8 |
duodenum | 2.59e-12 | 2 |
spinal cord | 2.89e-12 | 3 |
dorsal region element | 2.89e-12 | 3 |
dorsum | 2.89e-12 | 3 |
nervous system | 1.98e-09 | 89 |
small intestine | 6.55e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.84e-50 | 6 |
neuroectodermal tumor | 1.68e-30 | 10 |
germ cell and embryonal cancer | 2.38e-14 | 22 |
germ cell cancer | 2.38e-14 | 22 |