FFCP PHASE1:Hg19::chr4:175204955..175204970,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80817 | |EntrezGene=80817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29356 | |HGNC=29356 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBX1 | |UniProt=D6RBX1 | ||
|association_with_transcript=74bp_to_ENST00000505124_5end | |association_with_transcript=74bp_to_ENST00000505124_5end | ||
|cluster_id=chr4:175204955..175204970,+ | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_9_at_CEP44_5end | |description=CAGE_peak_9_at_CEP44_5end | ||
|id=chr4:175204955..175204970,+ | |id=chr4:175204955..175204970,+ | ||
|ontology_enrichment_celltype=CL:0000037!5.05e-11!172;CL:0000566!5.05e-11!172;CL:0002032!1.54e-10!165;CL:0000837!1.54e-10!165;CL:0000738!2.32e-10!140;CL:0000860!4.14e-10!45;CL:0002031!1.25e-09!124;CL:0000988!1.79e-09!182;CL:0002057!3.15e-09!42;CL:0002087!4.69e-09!119;CL:0000763!1.94e-08!112;CL:0000049!1.94e-08!112;CL:0000766!1.25e-07!76;CL:0000839!1.58e-07!70;CL:0000557!2.79e-07!71 | |ontology_enrichment_celltype=CL:0000037!5.05e-11!172;CL:0000566!5.05e-11!172;CL:0002032!1.54e-10!165;CL:0000837!1.54e-10!165;CL:0000738!2.32e-10!140;CL:0000860!4.14e-10!45;CL:0002031!1.25e-09!124;CL:0000988!1.79e-09!182;CL:0002057!3.15e-09!42;CL:0002087!4.69e-09!119;CL:0000763!1.94e-08!112;CL:0000049!1.94e-08!112;CL:0000766!1.25e-07!76;CL:0000839!1.58e-07!70;CL:0000557!2.79e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.34e-30;5!CL:0000313;3.16e-18;1!CL:0002321;1.17e-10;15!CL:0000159;8.69e-10;2!CL:1000415;1.64e-09;2!CL:0000623;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.16e-18,1;CL:0000159,8.69e-10,2;CL:1000415,1.33e-09,2;CL:0000623,9.64e-07,3;CL:0000825,9.64e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.76e-08!235;DOID:14566!2.63e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:169;1.24e-25;6!DOID:2152;3.16e-18;1!DOID:171;1.14e-15;10!DOID:3095;1.92e-07;22!DOID:2994;1.92e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.19e-25,6;DOID:2152,3.16e-18,1;DOID:171,1.11e-15,10;DOID:3095,1.89e-07,22;DOID:2994,1.89e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.10e-08!102;UBERON:0003061!7.10e-08!102;UBERON:0001474!3.15e-07!86;UBERON:0002371!6.91e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!7.10e-08!102;UBERON:0003061!7.10e-08!102;UBERON:0001474!3.15e-07!86;UBERON:0002371!6.91e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.34e-30;5!UBERON:0002410;1.34e-30;5!UBERON:0004911;3.16e-18;1!UBERON:0000010;2.47e-17;8!UBERON:0004909;8.69e-10;2!UBERON:0001905;1.64e-09;2!UBERON:0002757;1.64e-09;2!UBERON:0010134;1.64e-09;2!UBERON:0005408;1.64e-09;2!UBERON:0001899;1.64e-09;2!UBERON:0002110;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.28e-30,5;UBERON:0002410,1.28e-30,5;UBERON:0004911,3.16e-18,1;UBERON:0000010,2.40e-17,8;UBERON:0004909,8.69e-10,2;UBERON:0001905,2.02e-09,2;UBERON:0002757,2.02e-09,2;UBERON:0010134,2.02e-09,2;UBERON:0005408,2.02e-09,2;UBERON:0001899,2.02e-09,2;UBERON:0002110,8.15e-07,3;UBERON:0006242,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0.290796477559129,0.377875943688809,0,0,0,0,0,0,0.945928919554341,0,0,2.70852973188684,0.376484679085209,0.272906150057846,0.449446968890169,0.306083892370903,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0.868755378820466,0,0,1.58231193720442,0.422510572623884,0.212604299965044,0.419317291016752,0.22465726229299,0.450530678524519,0.48217676009124,0,0.39783335439818,0.730656615058536,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0.560508562981536,0,0.393419540227666,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0.664601683750863,2.16643091012012,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0.68725489096526,0.506039384039006,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0.414656231081544,0,0.50496973370552,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,1.37921532141349,0.862510299438069,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.66614393599564,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0,0,0.503865495708552,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33283690706603,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0.335643173951685,0.189753732724185,0.476809736941136,0,0.489698424477443,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0,0,0.171986032471617,0.19351266257817,0,0.328461828212837,0,0.0882561266915003,0,0,0,0,1.95551382734803,0,0.213452994739353,0,0,0.114536596165916,0,0.14405479798815,0,0.235694034616795,0,0,0.101998217636322,0.577901179803038,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0.265729680626726,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,3.7089367678059,16.3893713322956,0,1.41972529649618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.591424344868181,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0.158013611732727,1.16241425368125,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,7.2706030668565,0.098150233615243,0,0,0,0,0,0,0.596852325484105,0.594600453887843,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0.193373663920732,0.0999411559249289,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0.36757959813938,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0.290796477559129,0.377875943688809,0,0,0,0,0,0,0.945928919554341,0,0,2.70852973188684,0.376484679085209,0.272906150057846,0.449446968890169,0.306083892370903,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0.868755378820466,0,0,1.58231193720442,0.422510572623884,0.212604299965044,0.419317291016752,0.22465726229299,0.450530678524519,0.48217676009124,0,0.39783335439818,0.730656615058536,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0.560508562981536,0,0.393419540227666,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0.664601683750863,2.16643091012012,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0.68725489096526,0.506039384039006,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0.414656231081544,0,0.50496973370552,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,1.37921532141349,0.862510299438069,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.66614393599564,0,0,0,0,0.111443384277478,0.284136146806413,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0,0,0.503865495708552,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33283690706603,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0.335643173951685,0.189753732724185,0.476809736941136,0,0.489698424477443,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0,0,0.171986032471617,0.19351266257817,0,0.328461828212837,0,0.0882561266915003,0,0,0,0,1.95551382734803,0,0.213452994739353,0,0,0.114536596165916,0,0.14405479798815,0,0.235694034616795,0,0,0.101998217636322,0.577901179803038,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0.265729680626726,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,3.7089367678059,16.3893713322956,0,1.41972529649618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.591424344868181,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0.158013611732727,1.16241425368125,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,7.2706030668565,0.098150233615243,0,0,0,0,0,0,0.596852325484105,0.594600453887843,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0.193373663920732,0.0999411559249289,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0.36757959813938,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p9@CEP44 | |short_description=p9@CEP44 | ||
}} | }} |
Latest revision as of 20:20, 16 September 2015
Short description: | p9@CEP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CEP44_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 74bp_to_ENST00000505124_5end |
EntrezGene: | CEP44 |
HGNC: | 29356 |
UniProt: | D6RBX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.16e-18 | 1 |
seromucus secreting cell | 8.69e-10 | 2 |
epithelial cell of gall bladder | 1.33e-09 | 2 |
natural killer cell | 9.64e-07 | 3 |
pro-NK cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.28e-30 | 5 |
autonomic nervous system | 1.28e-30 | 5 |
epithelium of female gonad | 3.16e-18 | 1 |
peripheral nervous system | 2.40e-17 | 8 |
epithelium of gonad | 8.69e-10 | 2 |
pineal body | 2.02e-09 | 2 |
regional part of epithalamus | 2.02e-09 | 2 |
secretory circumventricular organ | 2.02e-09 | 2 |
circumventricular organ | 2.02e-09 | 2 |
epithalamus | 2.02e-09 | 2 |
gallbladder | 8.15e-07 | 3 |
gall bladder primordium | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.19e-25 | 6 |
ovary epithelial cancer | 3.16e-18 | 1 |
neuroectodermal tumor | 1.11e-15 | 10 |
germ cell and embryonal cancer | 1.89e-07 | 22 |
germ cell cancer | 1.89e-07 | 22 |