FFCP PHASE1:Hg19::chr2:29337010..29337046,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=79745 | |EntrezGene=79745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=26108 | |HGNC=26108 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=A8K6D0,Q8N3C7 | |UniProt=A8K6D0,Q8N3C7 | ||
|association_with_transcript=148bp_to_ENST00000402240,ENST00000404424,uc010ezm.1_5end | |association_with_transcript=148bp_to_ENST00000402240,ENST00000404424,uc010ezm.1_5end | ||
|cluster_id=chr2:29337010..29337046,+ | |||
|description=CAGE_peak_2_at_CLIP4_5end | |description=CAGE_peak_2_at_CLIP4_5end | ||
|id=chr2:29337010..29337046,+ | |id=chr2:29337010..29337046,+ | ||
Latest revision as of 20:30, 16 September 2015
| Short description: | p2@CLIP4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CLIP4_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 148bp_to_ENST00000402240, ENST00000404424, uc010ezm.1_5end |
| EntrezGene: | CLIP4 |
| HGNC: | 26108 |
| UniProt: | A8K6D0Q8N3C7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@CLIP4 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 1.01e-33 | 48 |
| phagocyte | 1.01e-33 | 48 |
| monopoietic cell | 4.46e-31 | 59 |
| monocyte | 4.46e-31 | 59 |
| monoblast | 4.46e-31 | 59 |
| promonocyte | 4.46e-31 | 59 |
| macrophage dendritic cell progenitor | 5.00e-31 | 61 |
| myeloid lineage restricted progenitor cell | 7.26e-29 | 66 |
| granulocyte monocyte progenitor cell | 9.11e-29 | 67 |
| classical monocyte | 1.86e-28 | 42 |
Showing 1 to 10 of 22 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 5.96e-25 | 76 |
| bone element | 1.63e-21 | 82 |
| skeletal element | 1.29e-20 | 90 |
| hematopoietic system | 7.19e-18 | 98 |
| blood island | 7.19e-18 | 98 |
| immune system | 3.43e-17 | 93 |
| skeletal system | 5.47e-17 | 100 |
| hemolymphoid system | 7.24e-15 | 108 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 2.17e-10 | 14 |
| carcinoma | 4.90e-07 | 106 |
Showing 1 to 2 of 2 entries
