FFCP PHASE1:Hg19::chr5:168728014..168728036,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:168728014..168728036,- to FFCP PHASE1:Hg19::chr5:168728014..168728036,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6586 | |EntrezGene=6586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11087 | |HGNC=11087 | ||
|TSSclassifier=strong | |||
|UniProt=O75094 | |UniProt=O75094 | ||
|association_with_transcript=96bp_to_ENST00000519560,NM_003062,uc003mab.2,uc010jjg.2,uc010jji.2_5end | |||
|cluster_id=chr5:168728014..168728036,- | |||
|coexpression_cluster_id=C859 | |||
|description=CAGE_peak_4_at_SLIT3_5end | |||
|id=chr5:168728014..168728036,- | |||
|ontology_enrichment_celltype=CL:0000055!2.93e-18!180;CL:0000057!1.09e-17!75;CL:0000136!1.07e-08!15;CL:0002620!2.87e-07!23;CL:0000359!4.88e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.93e-09;13!CL:0002620;3.94e-08;23!CL:0000057;2.20e-07;73!CL:0002334;2.46e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.13e-18,76;CL:0000136,1.71e-10,15;CL:0002620,2.64e-08,23;CL:0002334,2.46e-07,12;CL:0000359,6.63e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.25e-14!365;UBERON:0003102!1.58e-12!95;UBERON:0000468!9.02e-10!659;UBERON:0004872!2.01e-09!84;UBERON:0007100!5.57e-09!27;UBERON:0000486!8.10e-09!82;UBERON:0000481!1.03e-08!347;UBERON:0000948!1.32e-08!24;UBERON:0005498!1.32e-08!24;UBERON:0004140!1.32e-08!24;UBERON:0009881!1.32e-08!24;UBERON:0004141!1.32e-08!24;UBERON:0003084!1.32e-08!24;UBERON:0007005!1.32e-08!24;UBERON:0004139!1.32e-08!24;UBERON:0004291!1.32e-08!24;UBERON:0000467!4.14e-08!625;UBERON:0000480!5.86e-08!626;UBERON:0007023!6.92e-08!115;UBERON:0000914!7.49e-08!83;UBERON:0002329!7.49e-08!83;UBERON:0003077!7.49e-08!83;UBERON:0003059!7.49e-08!83;UBERON:0007282!7.49e-08!83;UBERON:0009618!7.49e-08!83;UBERON:0007285!7.49e-08!83;UBERON:0002199!8.12e-08!45;UBERON:0002416!8.12e-08!45;UBERON:0001637!1.98e-07!42;UBERON:0003509!1.98e-07!42;UBERON:0004572!1.98e-07!42;UBERON:0004290!2.35e-07!70;UBERON:0004923!3.87e-07!57;UBERON:0002097!6.13e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.21e-08;25!UBERON:0000948;4.24e-08;22!UBERON:0002199;2.65e-07;46!UBERON:0002416;2.65e-07;46!UBERON:0002097;4.78e-07;41!UBERON:0004457;5.69e-07;9!UBERON:0000042;5.69e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.91e-11,99;UBERON:0002199,4.79e-10,46;UBERON:0002416,4.79e-10,46;UBERON:0002097,7.81e-09,41;UBERON:0004872,8.55e-09,83;UBERON:0007100,1.91e-08,27;UBERON:0000948,6.20e-08,24;UBERON:0005498,6.20e-08,24;UBERON:0004140,6.20e-08,24;UBERON:0009881,6.20e-08,24;UBERON:0004141,6.20e-08,24;UBERON:0003084,6.20e-08,24;UBERON:0007005,6.20e-08,24;UBERON:0004139,6.20e-08,24;UBERON:0004291,6.20e-08,24;UBERON:0001637,3.33e-07,42;UBERON:0003509,3.33e-07,42;UBERON:0004572,3.33e-07,42;UBERON:0004573,9.53e-07,33;UBERON:0004571,9.53e-07,33 | |||
|phase1_expression=14.8976271001856,14.3447351006959,10.4306259031019,17.0124607200322,8.93922188854576,6.97870819280295,0,4.42203911398782,15.4099520637905,0.245733936501509,0,1.09220686065086,4.22027165165526,0,0,0,0,2.19093027116212,0.487932798790507,1.10808952269109,1.42800483870977,1.56727360739044,0.85870796139317,0.684372125364421,2.76193807108566,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,0.670700859703636,1.40648818027883,2.1686349143074,4.51204119572301,3.91085601194224,0,0.973269740605272,0.472674085820339,1.10864698731282,0.790513071238134,2.48860243445654,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,1.72046919021225,0,0,0.838998872419812,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0.872188104285069,14.4121865991642,4.43206790826029,2.38336525463794,18.3575437279241,5.67469411517371,6.72813120170769,2.1349799145941,3.7000132262574,7.15785381419462,0.808264032418128,0.163461903113459,0.302714855289863,0,4.68642863667593,1.5608003841516,0.570471821544449,1.79338416662161,2.70099346880659,2.10434827678571,1.26405726032024,0.816616685019573,0.859840221182376,3.92637968467909,10.6920257155385,4.94533858557114,0,0,1.5150250255866,1.62654075833553,3.04770527032601,5.70670907145089,2.45190236639216,4.35690370829131,0.567160915800105,4.48474089222155,19.8608371601268,15.471028784648,2.70081986475962,6.08009922506789,4.3798891807757,8.00302482225836,1.85653965465393,8.18470843354068,4.79624171063818,16.2007821610447,22.6304479546337,6.74518225781567,1.91428986632517,3.56077243852024,1.35282597214308,0.272746120590835,0.573609190778008,0,0,0.232387885739037,0.414644220061482,0.252320850875628,0,3.12899064659632,10.935095949279,1.38134921352481,8.8229906326076,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,5.3504621473082,4.41026134156626,0,0,0.590789906681404,0,0,1.02940686179115,2.41450627898976,3.37205259772859,0,0.277765335475589,4.56131627434455,5.19967392639789,1.44331342025273,1.73895607462615,0.70445216541493,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0.447792613514241,0.581267877027924,2.30029607499127,0,0,0.621984346622316,0.288239906833923,0.37872730027914,0,0,0,3.4214489204541,0.205654985406647,0,0,0,0,0.07333828582095,3.10252117818667,0,0,0.797814349754612,0,0,1.41849132023278,0,0.714889968290738,10.3098105024374,0,0,1.06617584622764,0,22.3065139024094,4.35766729300147,16.1956245714932,0,0,0,0.479249710983165,0,0,0.144781306667579,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,1.08506009479894,6.65506756898583,4.28229573113188,4.1002627908823,9.01988895443892,5.71797589482666,6.82222512167955,0,3.98535359121262,1.84369168541703,2.86715927744673,0.783204629850962,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,3.0239029332968,20.8410558567773,5.83155498494637,15.155645099386,18.836454940588,14.3278029738677,7.72098821489316,8.90508398669946,1.3878872442239,6.21466038595945,3.03870477251094,0,4.88083589531829,0,2.6065841139427,1.84161977871793,0,0.182091168006717,0,0.451199612907412,0.15403067420883,0.784349769176855,0,0.422206515571503,0,0,0.215915916102139,0,1.35473218771926,2.00675909541941,0,0,0,0,0,2.05160100093111,1.96808787419823,0.650756789328606,4.43076350085206,2.1060976908219,1.32015199872941,2.29706215198469,2.60024098414608,0,0.870036464629098,0.308097234229289,0.767518373630648,0,0.214840489736547,0.435050081742686,0.0852266274161009,2.1367688555217,1.65284915360978,2.30628080838127,0.382838137483752,3.6416801107998,9.29691098594571,13.8517432605482,2.0911118104818,3.38836938193698,3.19383618190213,2.60979897622522,10.0075078316117,3.86437194203376,0,0,0,0.767693373934002,1.71175595213568,7.63687795022248,0.78494864019923,0.179872457583315,1.37268514868027,1.17812402345686,3.63928466831969,4.75530963519025,5.47635993110675,0,0.974853958525138,3.16950440270266,0.272999822815972,0.282810863907425,5.65040583101214,15.9895949628376,7.96126770289464,6.13831239355268,0,0,5.88440093191842,2.78841148289775,5.63391205064483,1.43411352204052,0.88424136911809,5.7067368237,0,29.555068941673,28.3193607945516,1.89736586882858,1.39973888097993,1.15466535270614,0,0,2.44773882019626,1.72202149068492,5.05414427002877,2.66058092122005,2.29723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,13.1857361344705,0,0,0,0.71623345421307,0.593929361665277,0.614321404198464,0,0.562677665642051,0,0,3.58913193817589,21.7180307193666,1.93398740871803,0,0,0,5.90975216557434,0,0,0,11.6399218651582,0,1.11136990144637,0.969332746095218,0.834912883456661,1.99613798001194,0,1.13697999995054,34.7999796208701,0,0,0,0,0,0,0.885741385813839,0.60298219312704,0,1.99042667876204,0.886642856860642,1.75508317723178,0,1.11538995422883,11.1577874830506,0.683652335082007,0,0,0,0.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| |phase1_expression=14.8976271001856,14.3447351006959,10.4306259031019,17.0124607200322,8.93922188854576,6.97870819280295,0,4.42203911398782,15.4099520637905,0.245733936501509,0,1.09220686065086,4.22027165165526,0,0,0,0,2.19093027116212,0.487932798790507,1.10808952269109,1.42800483870977,1.56727360739044,0.85870796139317,0.684372125364421,2.76193807108566,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,0.670700859703636,1.40648818027883,2.1686349143074,4.51204119572301,3.91085601194224,0,0.973269740605272,0.472674085820339,1.10864698731282,0.790513071238134,2.48860243445654,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,1.72046919021225,0,0,0.838998872419812,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0.872188104285069,14.4121865991642,4.43206790826029,2.38336525463794,18.3575437279241,5.67469411517371,6.72813120170769,2.1349799145941,3.7000132262574,7.15785381419462,0.808264032418128,0.163461903113459,0.302714855289863,0,4.68642863667593,1.5608003841516,0.570471821544449,1.79338416662161,2.70099346880659,2.10434827678571,1.26405726032024,0.816616685019573,0.859840221182376,3.92637968467909,10.6920257155385,4.94533858557114,0,0,1.5150250255866,1.62654075833553,3.04770527032601,5.70670907145089,2.45190236639216,4.35690370829131,0.567160915800105,4.48474089222155,19.8608371601268,15.471028784648,2.70081986475962,6.08009922506789,4.3798891807757,8.00302482225836,1.85653965465393,8.18470843354068,4.79624171063818,16.2007821610447,22.6304479546337,6.74518225781567,1.91428986632517,3.56077243852024,1.35282597214308,0.272746120590835,0.573609190778008,0,0,0.232387885739037,0.414644220061482,0.252320850875628,0,3.12899064659632,10.935095949279,1.38134921352481,8.8229906326076,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,5.3504621473082,4.41026134156626,0,0,0.590789906681404,0,0,1.02940686179115,2.41450627898976,3.37205259772859,0,0.277765335475589,4.56131627434455,5.19967392639789,1.44331342025273,1.73895607462615,0.70445216541493,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0.447792613514241,0.581267877027924,2.30029607499127,0,0,0.621984346622316,0.288239906833923,0.37872730027914,0,0,0,3.4214489204541,0.205654985406647,0,0,0,0,0.07333828582095,3.10252117818667,0,0,0.797814349754612,0,0,1.41849132023278,0,0.714889968290738,10.3098105024374,0,0,1.06617584622764,0,22.3065139024094,4.35766729300147,16.1956245714932,0,0,0,0.479249710983165,0,0,0.144781306667579,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,1.08506009479894,6.65506756898583,4.28229573113188,4.1002627908823,9.01988895443892,5.71797589482666,6.82222512167955,0,3.98535359121262,1.84369168541703,2.86715927744673,0.783204629850962,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,3.0239029332968,20.8410558567773,5.83155498494637,15.155645099386,18.836454940588,14.3278029738677,7.72098821489316,8.90508398669946,1.3878872442239,6.21466038595945,3.03870477251094,0,4.88083589531829,0,2.6065841139427,1.84161977871793,0,0.182091168006717,0,0.451199612907412,0.15403067420883,0.784349769176855,0,0.422206515571503,0,0,0.215915916102139,0,1.35473218771926,2.00675909541941,0,0,0,0,0,2.05160100093111,1.96808787419823,0.650756789328606,4.43076350085206,2.1060976908219,1.32015199872941,2.29706215198469,2.60024098414608,0,0.870036464629098,0.308097234229289,0.767518373630648,0,0.214840489736547,0.435050081742686,0.0852266274161009,2.1367688555217,1.65284915360978,2.30628080838127,0.382838137483752,3.6416801107998,9.29691098594571,13.8517432605482,2.0911118104818,3.38836938193698,3.19383618190213,2.60979897622522,10.0075078316117,3.86437194203376,0,0,0,0.767693373934002,1.71175595213568,7.63687795022248,0.78494864019923,0.179872457583315,1.37268514868027,1.17812402345686,3.63928466831969,4.75530963519025,5.47635993110675,0,0.974853958525138,3.16950440270266,0.272999822815972,0.282810863907425,5.65040583101214,15.9895949628376,7.96126770289464,6.13831239355268,0,0,5.88440093191842,2.78841148289775,5.63391205064483,1.43411352204052,0.88424136911809,5.7067368237,0,29.555068941673,28.3193607945516,1.89736586882858,1.39973888097993,1.15466535270614,0,0,2.44773882019626,1.72202149068492,5.05414427002877,2.66058092122005,2.29723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,13.1857361344705,0,0,0,0.71623345421307,0.593929361665277,0.614321404198464,0,0.562677665642051,0,0,3.58913193817589,21.7180307193666,1.93398740871803,0,0,0,5.90975216557434,0,0,0,11.6399218651582,0,1.11136990144637,0.969332746095218,0.834912883456661,1.99613798001194,0,1.13697999995054,34.7999796208701,0,0,0,0,0,0,0.885741385813839,0.60298219312704,0,1.99042667876204,0.886642856860642,1.75508317723178,0,1.11538995422883,11.1577874830506,0.683652335082007,0,0,0,0.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| ||
|short_description=p4@SLIT3 | |||
}} | }} |
Latest revision as of 20:32, 16 September 2015
Short description: | p4@SLIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLIT3_5end |
Coexpression cluster: | C859_Fibroblast_Synoviocyte_Preadipocyte_mesothelioma_tenocyte_Mesothelial_Smooth |
Association with transcript: | 96bp_to_ENST00000519560, NM_003062, uc003mab.2, uc010jjg.2, uc010jji.2_5end |
EntrezGene: | SLIT3 |
HGNC: | 11087 |
UniProt: | O75094 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.13e-18 | 76 |
fat cell | 1.71e-10 | 15 |
skin fibroblast | 2.64e-08 | 23 |
preadipocyte | 2.46e-07 | 12 |
vascular associated smooth muscle cell | 6.63e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.91e-11 | 99 |
integument | 4.79e-10 | 46 |
integumental system | 4.79e-10 | 46 |
skin of body | 7.81e-09 | 41 |
splanchnic layer of lateral plate mesoderm | 8.55e-09 | 83 |
primary circulatory organ | 1.91e-08 | 27 |
heart | 6.20e-08 | 24 |
primitive heart tube | 6.20e-08 | 24 |
primary heart field | 6.20e-08 | 24 |
anterior lateral plate mesoderm | 6.20e-08 | 24 |
heart tube | 6.20e-08 | 24 |
heart primordium | 6.20e-08 | 24 |
cardiac mesoderm | 6.20e-08 | 24 |
cardiogenic plate | 6.20e-08 | 24 |
heart rudiment | 6.20e-08 | 24 |
artery | 3.33e-07 | 42 |
arterial blood vessel | 3.33e-07 | 42 |
arterial system | 3.33e-07 | 42 |
systemic artery | 9.53e-07 | 33 |
systemic arterial system | 9.53e-07 | 33 |