FFCP PHASE1:Hg19::chr2:128177253..128177288,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5624 | |EntrezGene=5624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9451 | |HGNC=9451 | ||
|TSSclassifier=strong | |||
|UniProt=E7EU72,F2Z2A0 | |UniProt=E7EU72,F2Z2A0 | ||
|association_with_transcript=0bp_to_ENST00000427769,ENST00000431364_5end | |association_with_transcript=0bp_to_ENST00000427769,ENST00000431364_5end | ||
|cluster_id=chr2:128177253..128177288,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_PROC_5end | |description=CAGE_peak_3_at_PROC_5end | ||
|id=chr2:128177253..128177288,+ | |id=chr2:128177253..128177288,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.04e-18!12;CL:0000417!5.04e-18!12;CL:0000668!5.04e-18!12;CL:0000414!5.04e-18!12;CL:0000412!5.04e-18!12;CL:0000182!5.04e-18!12 | |ontology_enrichment_celltype=CL:0000181!5.04e-18!12;CL:0000417!5.04e-18!12;CL:0000668!5.04e-18!12;CL:0000414!5.04e-18!12;CL:0000412!5.04e-18!12;CL:0000182!5.04e-18!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.28e-53;12!CL:0000222;2.11e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.42e-53,12;CL:0000223,1.19e-10,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.33e-42;11!UBERON:0009497;4.87e-36;13!UBERON:0001041;1.61e-15;30!UBERON:0003104;1.31e-14;31!CL:0000223;1.31e-07;58 | |||
|ontology_enrichment_disease=DOID:154!1.69e-09!2;DOID:4236!1.69e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.53e-18!19;UBERON:0006925!3.53e-18!19;UBERON:0008836!3.53e-18!19;UBERON:0005057!1.29e-15!26;UBERON:0008835!1.83e-15!22;UBERON:0003894!1.83e-15!22;UBERON:0009854!1.02e-14!23;UBERON:0000988!1.81e-13!3;UBERON:0007499!2.11e-13!25;UBERON:0009497!2.11e-13!25;UBERON:0000015!2.11e-13!25;UBERON:0002423!2.11e-13!25;UBERON:0006235!2.11e-13!25;UBERON:0004161!2.11e-13!25;UBERON:0002298!4.89e-13!8;UBERON:0009856!8.05e-13!26;UBERON:0002365!1.77e-10!31;UBERON:0002330!1.77e-10!31;UBERON:0003076!1.16e-09!15;UBERON:0003057!1.16e-09!15;UBERON:0002148!2.19e-09!2;UBERON:0009662!2.19e-09!2;UBERON:0002368!4.34e-09!35;UBERON:0004733!1.32e-08!12;UBERON:0002028!1.32e-08!12;UBERON:0007277!1.32e-08!12;UBERON:0004732!6.38e-08!13;UBERON:0005172!1.16e-07!55;UBERON:0005173!1.16e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.55e-55;19!UBERON:0006925;2.55e-55;19!UBERON:0002423;7.08e-42;25!UBERON:0002365;1.32e-32;31!UBERON:0002330;1.32e-32;31!UBERON:0002368;1.68e-28;33!UBERON:0000949;6.39e-18;43!UBERON:0005172;1.00e-12;52!UBERON:0005173;1.00e-12;52!UBERON:0002530;2.07e-10;57!UBERON:0002417;3.80e-09;58!UBERON:0000916;3.80e-09;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.64e-55,19;UBERON:0006925,2.64e-55,19;UBERON:0008836,2.64e-55,19;UBERON:0008835,1.14e-47,22;UBERON:0003894,1.14e-47,22;UBERON:0009854,1.44e-45,23;UBERON:0007499,7.25e-42,25;UBERON:0009497,7.25e-42,25;UBERON:0000015,7.25e-42,25;UBERON:0002423,7.25e-42,25;UBERON:0006235,7.25e-42,25;UBERON:0004161,7.25e-42,25;UBERON:0009856,3.15e-40,26;UBERON:0002365,1.28e-33,31;UBERON:0002330,1.28e-33,31;UBERON:0002368,1.09e-29,35;UBERON:0000949,6.57e-23,45;UBERON:0003929,6.02e-19,54;UBERON:0005172,6.02e-19,54;UBERON:0005173,6.02e-19,54;UBERON:0002530,2.89e-17,59;UBERON:0002417,5.79e-17,60;UBERON:0000916,5.79e-17,60;UBERON:0005911,3.67e-12,82;UBERON:0001041,2.08e-11,87;UBERON:0005177,1.09e-09,101;UBERON:0009569,1.22e-08,112;UBERON:0003914,3.16e-08,117;UBERON:0004921,4.52e-08,118;UBERON:0005256,7.57e-08,122 | |||
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| ||
|short_description=p3@PROC | |short_description=p3@PROC | ||
}} | }} |
Latest revision as of 20:35, 16 September 2015
Short description: | p3@PROC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PROC_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000427769, ENST00000431364_5end |
EntrezGene: | PROC |
HGNC: | 9451 |
UniProt: | E7EU72F2Z2A0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.42e-53 | 12 |
endodermal cell | 1.19e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.64e-55 | 19 |
digestive gland | 2.64e-55 | 19 |
liver bud | 2.64e-55 | 19 |
hepatic diverticulum | 1.14e-47 | 22 |
liver primordium | 1.14e-47 | 22 |
digestive tract diverticulum | 1.44e-45 | 23 |
epithelial sac | 7.25e-42 | 25 |
epithelium of foregut-midgut junction | 7.25e-42 | 25 |
anatomical boundary | 7.25e-42 | 25 |
hepatobiliary system | 7.25e-42 | 25 |
foregut-midgut junction | 7.25e-42 | 25 |
septum transversum | 7.25e-42 | 25 |
sac | 3.15e-40 | 26 |
exocrine gland | 1.28e-33 | 31 |
exocrine system | 1.28e-33 | 31 |
endocrine gland | 1.09e-29 | 35 |
endocrine system | 6.57e-23 | 45 |
gut epithelium | 6.02e-19 | 54 |
abdomen element | 6.02e-19 | 54 |
abdominal segment element | 6.02e-19 | 54 |
gland | 2.89e-17 | 59 |
abdominal segment of trunk | 5.79e-17 | 60 |
abdomen | 5.79e-17 | 60 |
endo-epithelium | 3.67e-12 | 82 |
foregut | 2.08e-11 | 87 |
trunk region element | 1.09e-09 | 101 |
subdivision of trunk | 1.22e-08 | 112 |
epithelial tube | 3.16e-08 | 117 |
subdivision of digestive tract | 4.52e-08 | 118 |
trunk mesenchyme | 7.57e-08 | 122 |