FFCP PHASE2:Hg19::chr20:48747662..48747704,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:387521,entrezgene:387522 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=387521,387522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16735,33521 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5TGE2 | ||
|association_with_transcript=0bp_to_ENST00000371656,uc010zyp.1_5end | |association_with_transcript=0bp_to_ENST00000371656,uc010zyp.1_5end | ||
|cluster_id=chr20:48747662..48747704,- | |cluster_id=chr20:48747662..48747704,- | ||
Latest revision as of 20:39, 16 September 2015
| Short description: | p3@TMEM189, p4@TMEM189-UBE2V1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_TMEM189_5end, CAGE_peak_4_at_TMEM189-UBE2V1_5end |
| Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
| Association with transcript: | 0bp_to_ENST00000371656, uc010zyp.1_5end |
| EntrezGene: | 387521,387522 |
| HGNC: | 33521&submit=Submit 16735, 33521 |
| UniProt: | Q5TGE2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@TMEM189p4@TMEM189-UBE2V1 |
|---|
0
5
10
15
20
25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| male organism | 9.63e-10 | 22 |
| male reproductive system | 9.63e-10 | 22 |
| intestine | 1.23e-08 | 17 |
| male genital duct | 6.73e-08 | 3 |
| internal male genitalia | 6.73e-08 | 3 |
| adult organism | 1.07e-07 | 114 |
| male reproductive organ | 5.83e-07 | 11 |
Showing 1 to 7 of 7 entries
