FFCP PHASE1:Hg19::chr7:142457254..142457278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5644,154754 | |EntrezGene=5644,154754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9475 | |HGNC=9475 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQ64,P07477 | |UniProt=E7EQ64,P07477 | ||
|association_with_transcript=-40bp_to_ENST00000486171,NM_002769,uc003wak.2,uc011ksm.1,uc011ksn.1_5end | |association_with_transcript=-40bp_to_ENST00000486171,NM_002769,uc003wak.2,uc011ksm.1,uc011ksn.1_5end | ||
|cluster_id=chr7:142457254..142457278,+ | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_3_at_PRSS1_5end | |description=CAGE_peak_3_at_PRSS1_5end | ||
|id=chr7:142457254..142457278,+ | |id=chr7:142457254..142457278,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.85e-09!254;CL:0002178!6.40e-09!3;CL:0000167!2.37e-07!1;CL:0000164!2.37e-07!1;CL:0000502!2.37e-07!1;CL:0000172!2.37e-07!1;CL:0000173!2.37e-07!1;CL:0002351!2.37e-07!1;CL:0002379!3.82e-07!1;CL:0002563!7.75e-07!4 | |ontology_enrichment_celltype=CL:0000066!5.85e-09!254;CL:0002178!6.40e-09!3;CL:0000167!2.37e-07!1;CL:0000164!2.37e-07!1;CL:0000502!2.37e-07!1;CL:0000172!2.37e-07!1;CL:0000173!2.37e-07!1;CL:0002351!2.37e-07!1;CL:0002379!3.82e-07!1;CL:0002563!7.75e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.79e-17;3!CL:0000167;9.73e-14;1!CL:0000164;9.73e-14;1!CL:0000502;9.73e-14;1!CL:0000172;9.73e-14;1!CL:0000173;9.73e-14;1!CL:0002563;3.42e-13;4!CL:0002251;4.10e-10;20!CL:0002253;2.12e-07;2!CL:0002076;3.07e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.94e-17,3;CL:0000167,8.58e-14,1;CL:0000164,8.58e-14,1;CL:0000502,8.58e-14,1;CL:0000172,8.58e-14,1;CL:0000173,8.58e-14,1;CL:0002351,8.58e-14,1;CL:0002563,3.21e-13,4;CL:0002251,4.10e-10,20;CL:0002253,1.99e-07,2;CL:0002076,2.66e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002351;9.73e-14;1!UBERON:0005754;2.07e-13;1!UBERON:0007297;2.40e-07;2 | |||
|ontology_enrichment_disease=DOID:3119!1.08e-19!14;DOID:305!1.14e-13!106;DOID:3493!1.52e-12!2;DOID:0050687!1.90e-10!143;DOID:299!7.40e-08!25;DOID:3111!1.55e-07!1;DOID:3603!1.55e-07!1;DOID:4430!2.37e-07!1;DOID:162!3.78e-07!235;DOID:3620!3.82e-07!1;DOID:3565!3.82e-07!1;DOID:0050619!6.12e-07!1;DOID:1357!6.12e-07!1;DOID:14566!6.57e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3119;5.36e-22;14!DOID:3111;3.50e-14;1!DOID:3603;3.50e-14;1!DOID:4430;9.73e-14;1!DOID:299;3.23e-08;25!DOID:3493;1.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,5.60e-22,14;DOID:3111,3.50e-14,1;DOID:3603,3.50e-14,1;DOID:4430,8.58e-14,1;DOID:305,1.82e-08,106;DOID:299,3.23e-08,25;DOID:3493,1.28e-07,2;DOID:0050687,1.83e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002394!1.66e-13!4;UBERON:0003928!1.66e-13!4;UBERON:0005409!9.58e-12!35;UBERON:0003350!6.36e-11!5;UBERON:0004921!2.77e-09!129;UBERON:0004185!2.77e-09!129;UBERON:0006947!1.10e-08!3;UBERON:0004054!1.10e-08!3;UBERON:0000344!5.70e-08!12;UBERON:0002294!6.35e-08!7;UBERON:0001173!6.35e-08!7;UBERON:0004912!6.35e-08!7;UBERON:0001046!2.35e-07!19;UBERON:0000058!2.36e-07!26;UBERON:0000998!3.60e-07!1;UBERON:0006868!3.60e-07!1;UBERON:0001007!3.67e-07!155;UBERON:0001555!3.67e-07!155;UBERON:0007026!3.67e-07!155;UBERON:0000945!3.70e-07!8;UBERON:0010039!3.70e-07!8;UBERON:0001000!4.31e-07!1;UBERON:0005352!4.31e-07!1;UBERON:0000160!4.85e-07!27;UBERON:0001764!6.12e-07!1;UBERON:0001825!6.12e-07!1;UBERON:0000077!6.69e-07!130;UBERON:0004913!7.73e-07!1;UBERON:0003703!7.73e-07!1;UBERON:0001174!7.73e-07!1;UBERON:0004914!7.73e-07!1;UBERON:0001242!7.75e-07!4;UBERON:0001262!7.75e-07!4;UBERON:0004786!7.75e-07!4;UBERON:0004808!7.75e-07!4;UBERON:0001277!7.75e-07!4;UBERON:0001052!9.21e-07!4;UBERON:0000997!9.73e-07!1;UBERON:0005056!9.73e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.06e-13;22!UBERON:0000998;2.07e-13;1!UBERON:0006868;2.07e-13;1!UBERON:0001242;3.42e-13;4!UBERON:0001262;3.42e-13;4!UBERON:0004786;3.42e-13;4!UBERON:0004808;3.42e-13;4!UBERON:0001277;3.42e-13;4!UBERON:0000945;7.14e-11;5!UBERON:0010039;7.14e-11;5!UBERON:0000485;6.29e-08;7!UBERON:0003929;6.29e-08;7!UBERON:0004921;1.32e-07;33!UBERON:0003350;4.84e-07;8!UBERON:0000160;9.39e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.07e-13,1;UBERON:0006868,2.07e-13,1;UBERON:0001242,3.21e-13,4;UBERON:0001262,3.21e-13,4;UBERON:0004786,3.21e-13,4;UBERON:0004808,3.21e-13,4;UBERON:0001277,3.21e-13,4;UBERON:0005409,7.34e-12,25;UBERON:0000945,4.15e-07,8;UBERON:0010039,4.15e-07,8;UBERON:0003350,4.69e-07,8;UBERON:0000160,9.20e-07,17 | |||
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|short_description=p3@PRSS1 | |short_description=p3@PRSS1 | ||
}} | }} |
Latest revision as of 20:54, 16 September 2015
Short description: | p3@PRSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRSS1_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | -40bp_to_ENST00000486171, NM_002769, uc003wak.2, uc011ksm.1, uc011ksn.1_5end |
EntrezGene: | 5644,154754 |
HGNC: | 9475 |
UniProt: | E7EQ64P07477 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.94e-17 | 3 |
peptide hormone secreting cell | 8.58e-14 | 1 |
enteroendocrine cell | 8.58e-14 | 1 |
type D enteroendocrine cell | 8.58e-14 | 1 |
somatostatin secreting cell | 8.58e-14 | 1 |
pancreatic D cell | 8.58e-14 | 1 |
progenitor cell of endocrine pancreas | 8.58e-14 | 1 |
intestinal epithelial cell | 3.21e-13 | 4 |
epithelial cell of alimentary canal | 4.10e-10 | 20 |
epithelial cell of large intestine | 1.99e-07 | 2 |
endo-epithelial cell | 2.66e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.07e-13 | 1 |
seminal fluid secreting gland | 2.07e-13 | 1 |
intestinal mucosa | 3.21e-13 | 4 |
wall of intestine | 3.21e-13 | 4 |
gastrointestinal system mucosa | 3.21e-13 | 4 |
gastrointestinal system epithelium | 3.21e-13 | 4 |
intestinal epithelium | 3.21e-13 | 4 |
gastrointestinal system | 7.34e-12 | 25 |
stomach | 4.15e-07 | 8 |
food storage organ | 4.15e-07 | 8 |
epithelium of mucosa | 4.69e-07 | 8 |
intestine | 9.20e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 5.60e-22 | 14 |
cystadenocarcinoma | 3.50e-14 | 1 |
mucinous cystadenocarcinoma | 3.50e-14 | 1 |
somatostatinoma | 8.58e-14 | 1 |
carcinoma | 1.82e-08 | 106 |
adenocarcinoma | 3.23e-08 | 25 |
signet ring cell adenocarcinoma | 1.28e-07 | 2 |
cell type cancer | 1.83e-07 | 143 |