FFCP PHASE1:Hg19::chr17:64224286..64224303,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=350 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=616 | |||
|TSSclassifier=strong | |||
|UniProt=D9IWP9 | |||
|association_with_transcript=10bp_to_HM212425_5end | |||
|cluster_id=chr17:64224286..64224303,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_APOH_5end | |||
|id=chr17:64224286..64224303,- | |||
|ontology_enrichment_celltype=CL:0000181!2.00e-49!12;CL:0000417!2.00e-49!12;CL:0000668!2.00e-49!12;CL:0000414!2.00e-49!12;CL:0000412!2.00e-49!12;CL:0000182!2.00e-49!12;CL:0000223!2.17e-13!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.31e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.05e-59,12;CL:0000223,2.91e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.86e-45;11!UBERON:0009497;5.95e-38;13!UBERON:0001041;1.32e-16;30!UBERON:0003104;4.84e-16;31!CL:0000223;3.54e-09;58 | |||
|ontology_enrichment_disease=DOID:3493!2.02e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.15e-55!19;UBERON:0006925!3.15e-55!19;UBERON:0008836!3.15e-55!19;UBERON:0008835!1.16e-47!22;UBERON:0003894!1.16e-47!22;UBERON:0009854!1.41e-45!23;UBERON:0007499!6.58e-42!25;UBERON:0009497!6.58e-42!25;UBERON:0000015!6.58e-42!25;UBERON:0002423!6.58e-42!25;UBERON:0006235!6.58e-42!25;UBERON:0004161!6.58e-42!25;UBERON:0005057!2.77e-40!26;UBERON:0009856!2.77e-40!26;UBERON:0002365!9.83e-34!31;UBERON:0002330!9.83e-34!31;UBERON:0002368!7.75e-30!35;UBERON:0003929!3.38e-24!54;UBERON:0000949!4.07e-23!45;UBERON:0005172!7.86e-19!55;UBERON:0005173!7.86e-19!55;UBERON:0002530!1.60e-17!59;UBERON:0002417!6.25e-17!61;UBERON:0000916!6.25e-17!61;UBERON:0005911!9.99e-16!82;UBERON:0001041!2.50e-10!98;UBERON:0004921!1.18e-09!129;UBERON:0004185!1.18e-09!129;UBERON:0005177!2.08e-09!107;UBERON:0000490!4.75e-09!138;UBERON:0009569!7.11e-09!113;UBERON:0002405!1.25e-08!115;UBERON:0003914!1.80e-08!118;UBERON:0001007!6.51e-08!155;UBERON:0001555!6.51e-08!155;UBERON:0007026!6.51e-08!155;UBERON:0000466!6.84e-08!126;UBERON:0000077!1.25e-07!130;UBERON:0004119!3.42e-07!169;UBERON:0000925!3.42e-07!169;UBERON:0006595!3.42e-07!169;UBERON:0005256!7.14e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.31e-66;19!UBERON:0006925;4.31e-66;19!UBERON:0002423;3.13e-50;25!UBERON:0002365;6.17e-39;31!UBERON:0002330;6.17e-39;31!UBERON:0002368;2.31e-34;33!UBERON:0000949;4.47e-25;43!UBERON:0005172;5.85e-15;52!UBERON:0005173;5.85e-15;52!UBERON:0002417;4.18e-13;58!UBERON:0000916;4.18e-13;58!UBERON:0002530;5.68e-13;57!UBERON:0001007;3.75e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.13e-66,19;UBERON:0006925,4.13e-66,19;UBERON:0008836,4.13e-66,19;UBERON:0008835,4.25e-57,22;UBERON:0003894,4.25e-57,22;UBERON:0009854,1.29e-54,23;UBERON:0007499,3.03e-50,25;UBERON:0009497,3.03e-50,25;UBERON:0000015,3.03e-50,25;UBERON:0002423,3.03e-50,25;UBERON:0006235,3.03e-50,25;UBERON:0004161,3.03e-50,25;UBERON:0009856,2.60e-48,26;UBERON:0002365,1.65e-40,31;UBERON:0002330,1.65e-40,31;UBERON:0002368,7.19e-36,35;UBERON:0000949,7.20e-28,45;UBERON:0003929,3.41e-23,54;UBERON:0005172,3.41e-23,54;UBERON:0005173,3.41e-23,54;UBERON:0002530,3.29e-21,59;UBERON:0002417,7.49e-21,60;UBERON:0000916,7.49e-21,60;UBERON:0005911,3.48e-15,82;UBERON:0001041,2.71e-14,87;UBERON:0005177,2.89e-12,101;UBERON:0009569,5.05e-11,112;UBERON:0003914,1.55e-10,117;UBERON:0004921,2.37e-10,118;UBERON:0005256,4.36e-10,122;UBERON:0001007,2.34e-08,145;UBERON:0001555,2.34e-08,145;UBERON:0007026,2.34e-08,145;UBERON:0000490,3.08e-08,148;UBERON:0001048,1.39e-07,160;UBERON:0003104,1.39e-07,160;UBERON:0009142,1.39e-07,160;UBERON:0004119,1.56e-07,160;UBERON:0000925,1.56e-07,160;UBERON:0006595,1.56e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.478154526838,7.86261773342101,5.90789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85989583184795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83619456306005,3.04938676010316,2.89835238572995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12932817873289,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@APOH | |||
}} |
Latest revision as of 21:13, 16 September 2015
Short description: | p4@APOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOH_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 10bp_to_HM212425_5end |
EntrezGene: | APOH |
HGNC: | 616 |
UniProt: | D9IWP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.05e-59 | 12 |
endodermal cell | 2.91e-12 | 58 |