FFCP PHASE1:Hg19::chr8:143781901..143781949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54742 | |EntrezGene=54742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24225 | |HGNC=24225 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000522591_5end | |association_with_transcript=11bp_to_ENST00000522591_5end | ||
|cluster_id=chr8:143781901..143781949,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_3_at_LY6K_5end | |description=CAGE_peak_3_at_LY6K_5end | ||
|id=chr8:143781901..143781949,+ | |id=chr8:143781901..143781949,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.55e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.58e-14;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.99e-11;14!DOID:4362;1.66e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.17e-21,106;DOID:0050687,3.40e-16,143;DOID:1749,2.05e-11,14;DOID:162,3.24e-08,235;DOID:14566,8.31e-08,239;DOID:4362,1.80e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.67e-10!9;UBERON:0004119!1.24e-08!169;UBERON:0000925!1.24e-08!169;UBERON:0006595!1.24e-08!169;UBERON:0000468!1.81e-08!659;UBERON:0001557!3.08e-08!19;UBERON:0000926!5.41e-08!448;UBERON:0004120!5.41e-08!448;UBERON:0006603!5.41e-08!448;UBERON:0000072!1.58e-07!46;UBERON:0000467!1.82e-07!625;UBERON:0000480!2.32e-07!626;UBERON:0001004!2.90e-07!72;UBERON:0003102!6.53e-07!95 | |ontology_enrichment_uberon=UBERON:0001737!5.67e-10!9;UBERON:0004119!1.24e-08!169;UBERON:0000925!1.24e-08!169;UBERON:0006595!1.24e-08!169;UBERON:0000468!1.81e-08!659;UBERON:0001557!3.08e-08!19;UBERON:0000926!5.41e-08!448;UBERON:0004120!5.41e-08!448;UBERON:0006603!5.41e-08!448;UBERON:0000072!1.58e-07!46;UBERON:0000467!1.82e-07!625;UBERON:0000480!2.32e-07!626;UBERON:0001004!2.90e-07!72;UBERON:0003102!6.53e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.47e-21;9!UBERON:0001557;5.47e-21;9!UBERON:0000072;1.35e-10;37!UBERON:0000065;1.72e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.60e-21,9;UBERON:0001557,3.33e-15,19;UBERON:0000072,1.92e-12,47;UBERON:0008947,1.32e-11,38;UBERON:0003258,1.32e-11,38;UBERON:0000065,3.83e-10,54;UBERON:0001004,1.25e-08,74;UBERON:0001041,3.94e-07,87;UBERON:0001723,8.58e-07,3;UBERON:0001033,8.58e-07,3;UBERON:0010056,8.58e-07,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,1.0007329835313,0,0,0,0,1.04474251279935,0,0,0,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0.383829398097213,0,4.59710612239464,0.90361775633475,0,0,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0.290796477559129,0,0,0,0.411167888021826,0,0.863077176966451,0.256160706529101,0,0,0,1.35426486594342,0,1.09162460023138,0,0.612167784741805,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.870627715885752,0,0,0,0,0.217188844705117,1.21079900526674,1.47311054395026,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0.722878304769133,0,0.144846518960824,0,0,0,0,0,5.04269440666194,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,1.10298924103761,0.81014194788176,0.17859945656816,0,0.563057402416611,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0,0.573673241497627,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0.936480230490962,0,0.298897361103602,0.352303495931295,0.647491777472526,0.842704840213491,0.61246251376468,0.491337269247072,0.206651562351531,0,0,0,0,0.168336113954066,0.500474079487857,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.717558542755448,0.213557388818567,0,3.00091096084402,0.103052529238439,0.515281080091258,0.558350568994769,0,0,0.504867548488229,0,0.323292113637624,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0,0,0,0.232387885739037,0.310983165046111,0,0,0,0.643240938192885,2.76269842704961,0.464367928031979,0,65.3053536219938,64.567936299913,54.2274817237834,62.3160945938026,67.9783865568307,59.7921960159963,64.3145339923984,54.7457887699716,51.5561190308163,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,1.60846355858609,0.0925884451585296,0.325808305310325,1.03993478527958,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,2.05984602216551,2.3250715081117,6.13412286664338,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.4400297149257,0,0,0.845302752556,0,0,0.257207374262142,4.25547396069835,0.799266537048298,0,0,0.823240336780769,0.977208552881205,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,1.08506009479894,0,0.178428988797162,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,1.81876542867756,1.66435439510497,0.604780586659361,0,0,0.280660094433074,0.640695746278505,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,5.34567740915813,0,0.200506470303285,0.460404944679482,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,2.92692372517824,1.99554777143968,0.413509717453592,0,0.580066775656914,0.511359764496605,0,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0.511795582622668,0,0.318203247925937,0.78494864019923,0,0,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0.86101074534246,1.68471475667626,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.47748896947538,0.890894042497916,1.84296421259539,0,0,0,0,0,0.398495976502139,0.276283915531148,20.1546198283421,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,2.89999830173917,4.55173793141999,17.7977555204936,5.2005289988946,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,28.9776312960514,2.37020365273626,0.0769502585037971,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,1.56531695145672,0,2.76209081994573,0,0,0.379119477770928,0,0,3.32326936353593,4.63388738225698,3.7671950208867,8.36307008410712,0,0,1.21491816834592,9.01530056212274,17.4118413160805,0.34945333648406,3.43972064943233,34.1549849450471,16.7374536127365,30.7111809379003,0.581934098930517,0,1.12990370390266,2.60379656828827,0,0,9.77756913674015,0.961905843018405,0.213452994739353,3.19695375331408,0,0,0,0,4.10033367365927,62.6946132080676,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,1.99679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.314727528809989,13.6224434110034,0,29.5549403871946,1.42939065274673,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0.13223260174269,0,1.40963004463334,0,0.157204305099666,0,0.496166021811951,0,0,2.553365031080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| ||
|short_description=p3@LY6K | |short_description=p3@LY6K | ||
}} | }} |
Latest revision as of 21:16, 16 September 2015
Short description: | p3@LY6K |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LY6K_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 11bp_to_ENST00000522591_5end |
EntrezGene: | LY6K |
HGNC: | 24225 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.55e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.60e-21 | 9 |
upper respiratory tract | 3.33e-15 | 19 |
segment of respiratory tract | 1.92e-12 | 47 |
respiratory primordium | 1.32e-11 | 38 |
endoderm of foregut | 1.32e-11 | 38 |
respiratory tract | 3.83e-10 | 54 |
respiratory system | 1.25e-08 | 74 |
foregut | 3.94e-07 | 87 |
tongue | 8.58e-07 | 3 |
gustatory system | 8.58e-07 | 3 |
future tongue | 8.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.17e-21 | 106 |
cell type cancer | 3.40e-16 | 143 |
squamous cell carcinoma | 2.05e-11 | 14 |
cancer | 3.24e-08 | 235 |
disease of cellular proliferation | 8.31e-08 | 239 |
cervical cancer | 1.80e-07 | 5 |