FFCP PHASE1:Hg19::chr2:30143819..30143830,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=238 | |EntrezGene=238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=427 | |HGNC=427 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPW7 | |UniProt=E7EPW7 | ||
|association_with_transcript=-294bp_to_ENST00000431873_5end | |association_with_transcript=-294bp_to_ENST00000431873_5end | ||
|cluster_id=chr2:30143819..30143830,- | |||
|coexpression_cluster_id=C102 | |coexpression_cluster_id=C102 | ||
|description=CAGE_peak_8_at_ALK_5end | |description=CAGE_peak_8_at_ALK_5end | ||
|id=chr2:30143819..30143830,- | |id=chr2:30143819..30143830,- | ||
|ontology_enrichment_celltype=CL:0000054!1.03e-09!2;CL:0000137!1.03e-09!2;CL:0000092!1.03e-09!2;CL:0002573!9.64e-07!2 | |ontology_enrichment_celltype=CL:0000054!1.03e-09!2;CL:0000137!1.03e-09!2;CL:0000092!1.03e-09!2;CL:0002573!9.64e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!2.91e-12!6;DOID:200!1.03e-09!2;DOID:4305!1.03e-09!2;DOID:171!1.02e-07!10 | |ontology_enrichment_disease=DOID:169!2.91e-12!6;DOID:200!1.03e-09!2;DOID:4305!1.03e-09!2;DOID:171!1.02e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001882!1.44e-17!1;UBERON:0005403!1.44e-17!1;UBERON:0002022!1.70e-17!1;UBERON:0000010!2.40e-17!8;UBERON:0000013!1.61e-14!5;UBERON:0002410!1.61e-14!5;UBERON:0000073!2.46e-10!94;UBERON:0001016!2.46e-10!94;UBERON:0000007!1.12e-09!2;UBERON:0002148!1.57e-09!2;UBERON:0009662!1.57e-09!2;UBERON:0002308!3.30e-08!9;UBERON:0000125!3.30e-08!9;UBERON:0001049!4.14e-07!57;UBERON:0005068!4.14e-07!57;UBERON:0006241!4.14e-07!57;UBERON:0007135!4.14e-07!57;UBERON:0002240!8.15e-07!3;UBERON:0000988!9.12e-07!3;UBERON:0006331!9.12e-07!3 | |ontology_enrichment_uberon=UBERON:0001882!1.44e-17!1;UBERON:0005403!1.44e-17!1;UBERON:0002022!1.70e-17!1;UBERON:0000010!2.40e-17!8;UBERON:0000013!1.61e-14!5;UBERON:0002410!1.61e-14!5;UBERON:0000073!2.46e-10!94;UBERON:0001016!2.46e-10!94;UBERON:0000007!1.12e-09!2;UBERON:0002148!1.57e-09!2;UBERON:0009662!1.57e-09!2;UBERON:0002308!3.30e-08!9;UBERON:0000125!3.30e-08!9;UBERON:0001049!4.14e-07!57;UBERON:0005068!4.14e-07!57;UBERON:0006241!4.14e-07!57;UBERON:0007135!4.14e-07!57;UBERON:0002240!8.15e-07!3;UBERON:0000988!9.12e-07!3;UBERON:0006331!9.12e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
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|short_description=p8@ALK | |short_description=p8@ALK | ||
}} | }} |
Latest revision as of 21:32, 16 September 2015
Short description: | p8@ALK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ALK_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -294bp_to_ENST00000431873_5end |
EntrezGene: | ALK |
HGNC: | 427 |
UniProt: | E7EPW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |