FFCP PHASE1:Hg19::chr2:30670077..30670125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253558 | |EntrezGene=253558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26756 | |HGNC=26756 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWP7,A6H8Z7,C9JMW2,C9JA02,C9JXY8,C9J5S5 | |UniProt=Q6UWP7,A6H8Z7,C9JMW2,C9JA02,C9JXY8,C9J5S5 | ||
|association_with_transcript=0bp_to_ENST00000309052,ENST00000319406,ENST00000359433,ENST00000379509,ENST00000444270,ENST00000465200,ENST00000465538,ENST00000466477,ENST00000488144,ENST00000491680,NM_182551,uc002rnj.2,uc010ymp.1_5end | |association_with_transcript=0bp_to_ENST00000309052,ENST00000319406,ENST00000359433,ENST00000379509,ENST00000444270,ENST00000465200,ENST00000465538,ENST00000466477,ENST00000488144,ENST00000491680,NM_182551,uc002rnj.2,uc010ymp.1_5end | ||
|cluster_id=chr2:30670077..30670125,+ | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_1_at_LCLAT1_5end | |description=CAGE_peak_1_at_LCLAT1_5end | ||
|id=chr2:30670077..30670125,+ | |id=chr2:30670077..30670125,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001041;8.35e-09;30 | |||
|ontology_enrichment_disease=DOID:14566!7.72e-30!239;DOID:162!2.23e-29!235;DOID:0050687!1.88e-27!143;DOID:305!3.29e-23!106;DOID:0050686!1.02e-13!137;DOID:7!2.15e-09!39;DOID:0050615!7.93e-07!16 | |ontology_enrichment_disease=DOID:14566!7.72e-30!239;DOID:162!2.23e-29!235;DOID:0050687!1.88e-27!143;DOID:305!3.29e-23!106;DOID:0050686!1.02e-13!137;DOID:7!2.15e-09!39;DOID:0050615!7.93e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:7;1.44e-07;39!DOID:0050615;5.43e-07;16!DOID:305;7.49e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.51e-30,239;DOID:162,2.16e-29,235;DOID:0050687,1.82e-27,143;DOID:305,3.19e-23,106;DOID:0050686,1.02e-13,137;DOID:7,2.15e-09,39;DOID:0050615,7.93e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001007!2.08e-14!155;UBERON:0001555!2.08e-14!155;UBERON:0007026!2.08e-14!155;UBERON:0004119!2.27e-12!169;UBERON:0000925!2.27e-12!169;UBERON:0006595!2.27e-12!169;UBERON:0004921!1.69e-11!129;UBERON:0004185!1.69e-11!129;UBERON:0000160!3.82e-10!27;UBERON:0005911!6.36e-10!82;UBERON:0005409!1.37e-09!35;UBERON:0000077!8.66e-09!130;UBERON:0002108!2.01e-07!14;UBERON:0000949!3.83e-07!45;UBERON:0003929!4.83e-07!54;UBERON:0002114!9.43e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.81e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.46e-11,145;UBERON:0001555,1.46e-11,145;UBERON:0007026,1.46e-11,145;UBERON:0005911,6.35e-10,82;UBERON:0004119,7.75e-10,160;UBERON:0000925,7.75e-10,160;UBERON:0006595,7.75e-10,160;UBERON:0004921,4.72e-09,118;UBERON:0000949,3.83e-07,45;UBERON:0003929,4.83e-07,54 | |||
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| ||
|short_description=p1@LCLAT1 | |short_description=p1@LCLAT1 | ||
}} | }} |
Latest revision as of 22:03, 16 September 2015
Short description: | p1@LCLAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LCLAT1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_ENST00000309052, ENST00000319406, ENST00000359433, ENST00000379509, ENST00000444270, ENST00000465200, ENST00000465538, ENST00000466477, ENST00000488144, ENST00000491680, NM_182551, uc002rnj.2, uc010ymp.1_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | Q6UWP7A6H8Z7C9JMW2C9JA02C9JXY8C9J5S5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 1.46e-11 | 145 |
digestive tract | 1.46e-11 | 145 |
primitive gut | 1.46e-11 | 145 |
endo-epithelium | 6.35e-10 | 82 |
endoderm-derived structure | 7.75e-10 | 160 |
endoderm | 7.75e-10 | 160 |
presumptive endoderm | 7.75e-10 | 160 |
subdivision of digestive tract | 4.72e-09 | 118 |
endocrine system | 3.83e-07 | 45 |
gut epithelium | 4.83e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.51e-30 | 239 |
cancer | 2.16e-29 | 235 |
cell type cancer | 1.82e-27 | 143 |
carcinoma | 3.19e-23 | 106 |
organ system cancer | 1.02e-13 | 137 |
disease of anatomical entity | 2.15e-09 | 39 |
respiratory system cancer | 7.93e-07 | 16 |