FFCP PHASE1:Hg19::chr10:126234531..126234556,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64077 | |EntrezGene=64077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30042 | |HGNC=30042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000493240_5end | |association_with_transcript=0bp_to_ENST00000493240_5end | ||
|cluster_id=chr10:126234531..126234556,+ | |||
|coexpression_cluster_id=C1568 | |coexpression_cluster_id=C1568 | ||
|description=CAGE_peak_8_at_LHPP_5end | |description=CAGE_peak_8_at_LHPP_5end | ||
|id=chr10:126234531..126234556,+ | |id=chr10:126234531..126234556,+ | ||
|ontology_enrichment_celltype=CL:0000236!9.69e-50!14;CL:0000945!1.44e-37!24;CL:0000826!1.44e-37!24;CL:0000838!2.17e-15!52;CL:0000542!4.94e-15!53;CL:0000051!4.94e-15!53;CL:0000817!2.23e-13!3;CL:0000785!8.75e-10!2;CL:0000955!8.75e-10!2;CL:0000818!8.75e-10!2;CL:0000954!8.75e-10!2;CL:0000816!8.75e-10!2 | |ontology_enrichment_celltype=CL:0000236!9.69e-50!14;CL:0000945!1.44e-37!24;CL:0000826!1.44e-37!24;CL:0000838!2.17e-15!52;CL:0000542!4.94e-15!53;CL:0000051!4.94e-15!53;CL:0000817!2.23e-13!3;CL:0000785!8.75e-10!2;CL:0000955!8.75e-10!2;CL:0000818!8.75e-10!2;CL:0000954!8.75e-10!2;CL:0000816!8.75e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.40e-61;24!CL:0000236;3.64e-60;13!CL:0000542;2.21e-22;53!CL:0000946;1.61e-13;1!CL:0000785;1.61e-13;1!CL:0000819;1.61e-13;1!CL:0000786;1.61e-13;1!CL:0000047;2.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.19e-70,14;CL:0000945,3.31e-61,24;CL:0000826,3.31e-61,24;CL:0000838,1.25e-27,52;CL:0000542,4.37e-27,53;CL:0000051,4.37e-27,53;CL:0000785,2.37e-25,2;CL:0000955,2.37e-25,2;CL:0000818,2.37e-25,2;CL:0000954,2.37e-25,2;CL:0000816,2.37e-25,2;CL:0000817,2.95e-17,3;CL:0000819,1.25e-13,1;CL:0000946,1.61e-13,1;CL:0000786,1.61e-13,1;CL:0000980,1.61e-13,1;CL:0002087,1.17e-11,115;CL:0002031,4.06e-11,120;CL:0000738,1.18e-09,136;CL:0002032,6.10e-08,161;CL:0000837,6.10e-08,161;CL:0000037,1.50e-07,168;CL:0000988,4.28e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;3.05e-25;2!CL:0000051;2.21e-22;53!UBERON:0004872;5.66e-08;7!UBERON:0006965;1.54e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.61e-13;1!DOID:8675;1.61e-13;1!DOID:0060058;6.62e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.25e-13,1;DOID:8675,1.25e-13,1;DOID:0060058,6.03e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.56e-16!115 | |ontology_enrichment_uberon=UBERON:0007023!6.56e-16!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;4.25e-14;1!UBERON:0001961;4.25e-14;1!UBERON:0001744;4.25e-14;1!UBERON:0001042;4.25e-14;1!UBERON:0001735;4.25e-14;1!UBERON:0006562;1.09e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,4.53e-14,1;UBERON:0001961,4.53e-14,1;UBERON:0001744,4.53e-14,1;UBERON:0001735,4.53e-14,1 | |||
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| ||
|short_description=p8@LHPP | |short_description=p8@LHPP | ||
}} | }} |
Latest revision as of 22:19, 16 September 2015
Short description: | p8@LHPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LHPP_5end |
Coexpression cluster: | C1568_lymphoma_CD19_vein_tonsil_Burkitt_non_diffuse |
Association with transcript: | 0bp_to_ENST00000493240_5end |
EntrezGene: | LHPP |
HGNC: | 30042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.19e-70 | 14 |
lymphocyte of B lineage | 3.31e-61 | 24 |
pro-B cell | 3.31e-61 | 24 |
lymphoid lineage restricted progenitor cell | 1.25e-27 | 52 |
lymphocyte | 4.37e-27 | 53 |
common lymphoid progenitor | 4.37e-27 | 53 |
mature B cell | 2.37e-25 | 2 |
pre-B-II cell | 2.37e-25 | 2 |
transitional stage B cell | 2.37e-25 | 2 |
small pre-B-II cell | 2.37e-25 | 2 |
immature B cell | 2.37e-25 | 2 |
precursor B cell | 2.95e-17 | 3 |
B-1 B cell | 1.25e-13 | 1 |
antibody secreting cell | 1.61e-13 | 1 |
plasma cell | 1.61e-13 | 1 |
plasmablast | 1.61e-13 | 1 |
nongranular leukocyte | 1.17e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 4.06e-11 | 120 |
leukocyte | 1.18e-09 | 136 |
hematopoietic oligopotent progenitor cell | 6.10e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-08 | 161 |
hematopoietic stem cell | 1.50e-07 | 168 |
hematopoietic cell | 4.28e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 4.53e-14 | 1 |
mucosa-associated lymphoid tissue | 4.53e-14 | 1 |
lymphoid tissue | 4.53e-14 | 1 |
tonsillar ring | 4.53e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.25e-13 | 1 |
lymphosarcoma | 1.25e-13 | 1 |
lymphoma | 6.03e-12 | 10 |