FFCP PHASE1:Hg19::chr10:126234615..126234639,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:126234615..126234639,+
|short_description=p6@LHPP
|description=CAGE_peak_6_at_LHPP_5end
|association_with_transcript=21bp_to_ENST00000482963_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64077 | |EntrezGene=64077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30042 | |HGNC=30042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000482963_5end | |||
|cluster_id=chr10:126234615..126234639,+ | |||
|coexpression_cluster_id=C1568 | |||
|description=CAGE_peak_6_at_LHPP_5end | |||
|id=chr10:126234615..126234639,+ | |||
|ontology_enrichment_celltype=CL:0000236!5.61e-38!14;CL:0000945!7.26e-32!24;CL:0000826!7.26e-32!24;CL:0000838!2.07e-12!52;CL:0000542!4.24e-12!53;CL:0000051!4.24e-12!53;CL:0002087!1.91e-07!119;CL:0000785!2.13e-07!2;CL:0000955!2.13e-07!2;CL:0000818!2.13e-07!2;CL:0000954!2.13e-07!2;CL:0000816!2.13e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.38e-71;13!CL:0000945;1.23e-51;24!CL:0000542;1.46e-18;53!CL:0000785;7.21e-08;1!CL:0000819;7.21e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.63e-66,14;CL:0000945,1.35e-51,24;CL:0000826,1.35e-51,24;CL:0000838,2.58e-22,52;CL:0000542,7.67e-22,53;CL:0000051,7.67e-22,53;CL:0002087,2.58e-11,115;CL:0002031,2.67e-09,120;CL:0000738,4.33e-09,136;CL:0000819,7.45e-08,1;CL:0000037,8.94e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;1.46e-18;53!UBERON:0009143;1.54e-07;1!UBERON:0001045;1.54e-07;1!UBERON:0006298;1.54e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;7.21e-08;1!DOID:8675;7.21e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,7.45e-08,1;DOID:8675,7.45e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.14e-17!115;UBERON:0000178!2.09e-15!15;UBERON:0000179!2.09e-15!15;UBERON:0000463!2.09e-15!15;UBERON:0003408!2.66e-07!10;UBERON:0001829!3.01e-07!2;UBERON:0004177!5.70e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.55e-10;15!UBERON:0000179;2.55e-10;15!UBERON:0000463;2.55e-10;15!UBERON:0002372;4.98e-08;1!UBERON:0001961;4.98e-08;1!UBERON:0001744;4.98e-08;1!UBERON:0001042;4.98e-08;1!UBERON:0001735;4.98e-08;1!UBERON:0000029;1.07e-07;1!UBERON:0001154;1.54e-07;1!UBERON:0001736;1.54e-07;1!UBERON:0001153;1.54e-07;1!UBERON:0009854;1.54e-07;1!UBERON:0002193;8.68e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.19e-10,15;UBERON:0000179,2.19e-10,15;UBERON:0000463,2.19e-10,15;UBERON:0002372,4.66e-08,1;UBERON:0001961,4.66e-08,1;UBERON:0001744,4.66e-08,1;UBERON:0001735,4.66e-08,1;UBERON:0000029,1.04e-07,1;UBERON:0001736,1.26e-07,1;UBERON:0006298,1.26e-07,1;UBERON:0001154,1.54e-07,1;UBERON:0001153,1.54e-07,1;UBERON:0001045,1.54e-07,1 | |||
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| ||
|short_description=p6@LHPP | |||
}} | }} |
Latest revision as of 22:20, 16 September 2015
Short description: | p6@LHPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LHPP_5end |
Coexpression cluster: | C1568_lymphoma_CD19_vein_tonsil_Burkitt_non_diffuse |
Association with transcript: | 21bp_to_ENST00000482963_5end |
EntrezGene: | LHPP |
HGNC: | 30042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.63e-66 | 14 |
lymphocyte of B lineage | 1.35e-51 | 24 |
pro-B cell | 1.35e-51 | 24 |
lymphoid lineage restricted progenitor cell | 2.58e-22 | 52 |
lymphocyte | 7.67e-22 | 53 |
common lymphoid progenitor | 7.67e-22 | 53 |
nongranular leukocyte | 2.58e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.67e-09 | 120 |
leukocyte | 4.33e-09 | 136 |
B-1 B cell | 7.45e-08 | 1 |
hematopoietic stem cell | 8.94e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 2.19e-10 | 15 |
haemolymphatic fluid | 2.19e-10 | 15 |
organism substance | 2.19e-10 | 15 |
tonsil | 4.66e-08 | 1 |
mucosa-associated lymphoid tissue | 4.66e-08 | 1 |
lymphoid tissue | 4.66e-08 | 1 |
tonsillar ring | 4.66e-08 | 1 |
lymph node | 1.04e-07 | 1 |
submandibular gland | 1.26e-07 | 1 |
submandibular gland primordium | 1.26e-07 | 1 |
vermiform appendix | 1.54e-07 | 1 |
caecum | 1.54e-07 | 1 |
midgut | 1.54e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 7.45e-08 | 1 |
lymphosarcoma | 7.45e-08 | 1 |