FFCP PHASE1:Hg19::chr2:31440377..31440385,-: Difference between revisions
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|id=chr2:31440377..31440385,-
|short_description=p1@CAPN14
|description=CAGE_peak_1_at_CAPN14_5end
|association_with_transcript=25bp_to_ENST00000403897,ENST00000444...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=440854 | |EntrezGene=440854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16664 | |HGNC=16664 | ||
|TSSclassifier=strong | |||
|UniProt=A8MX76,B7Z467 | |UniProt=A8MX76,B7Z467 | ||
|association_with_transcript=25bp_to_ENST00000403897,ENST00000444918,NM_001145122,uc010yms.1_5end | |||
|cluster_id=chr2:31440377..31440385,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_CAPN14_5end | |||
|id=chr2:31440377..31440385,- | |||
|ontology_enrichment_celltype=CL:0002368!8.48e-10!13;CL:0002076!1.10e-09!43 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.48e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.77e-10,13 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.74e-10;1!UBERON:0000358;6.59e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!4.26e-09!2;UBERON:0003127!5.58e-09!2;UBERON:0003126!6.33e-09!7;UBERON:0001005!6.33e-09!7;UBERON:0001004!3.64e-08!72;UBERON:0000065!1.05e-07!53;UBERON:0000161!5.57e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;3.03e-18;2!UBERON:0003127;4.85e-18;2!UBERON:0001723;1.86e-12;3!UBERON:0001033;1.86e-12;3!UBERON:0003126;1.68e-11;7!UBERON:0001005;1.68e-11;7!UBERON:0002372;4.09e-10;1!UBERON:0001961;4.09e-10;1!UBERON:0001744;4.09e-10;1!UBERON:0001042;4.09e-10;1!UBERON:0001735;4.09e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.90e-18,2;UBERON:0003127,5.28e-18,2;UBERON:0001723,1.92e-12,3;UBERON:0001033,1.92e-12,3;UBERON:0010056,1.92e-12,3;UBERON:0003126,1.74e-11,7;UBERON:0001005,1.74e-11,7;UBERON:0000065,2.89e-11,54;UBERON:0002372,4.09e-10,1;UBERON:0001961,4.09e-10,1;UBERON:0001744,4.09e-10,1;UBERON:0001735,4.09e-10,1;UBERON:0001004,1.04e-09,74;UBERON:0001042,2.45e-08,10;UBERON:0009145,2.45e-08,10;UBERON:0006562,1.28e-07,11 | |||
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| ||
|short_description=p1@CAPN14 | |||
}} | }} |
Latest revision as of 22:38, 16 September 2015
Short description: | p1@CAPN14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAPN14_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 25bp_to_ENST00000403897, ENST00000444918, NM_001145122, uc010yms.1_5end |
EntrezGene: | CAPN14 |
HGNC: | 16664 |
UniProt: | A8MX76B7Z467 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.77e-10 | 13 |
Ontology term | p-value | n |
---|---|---|
throat | 2.90e-18 | 2 |
open tracheal system trachea | 5.28e-18 | 2 |
tongue | 1.92e-12 | 3 |
gustatory system | 1.92e-12 | 3 |
future tongue | 1.92e-12 | 3 |
trachea | 1.74e-11 | 7 |
respiratory airway | 1.74e-11 | 7 |
respiratory tract | 2.89e-11 | 54 |
tonsil | 4.09e-10 | 1 |
mucosa-associated lymphoid tissue | 4.09e-10 | 1 |
lymphoid tissue | 4.09e-10 | 1 |
tonsillar ring | 4.09e-10 | 1 |
respiratory system | 1.04e-09 | 74 |
chordate pharynx | 2.45e-08 | 10 |
pharyngeal region of foregut | 2.45e-08 | 10 |
pharynx | 1.28e-07 | 11 |