FFCP PHASE1:Hg19::chr1:246580686..246580691,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64754 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15513 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=19bp_to_uc001ibk.2_5end | |||
|cluster_id=chr1:246580686..246580691,- | |||
|coexpression_cluster_id=C2577 | |||
|description=CAGE_peak_6_at_SMYD3_5end | |||
|id=chr1:246580686..246580691,- | |||
|ontology_enrichment_celltype=CL:0000055!9.30e-12!180;CL:0002620!3.54e-11!23;CL:0000057!1.21e-10!75;CL:0002570!4.21e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.98e-15;2!CL:0002570;1.40e-14;8!CL:0002579;2.16e-10;3!CL:0000077;2.75e-09;19!CL:0000511;2.05e-08;1!CL:0002625;2.05e-08;1!CL:0000216;2.05e-08;1!CL:0000723;2.76e-07;61!CL:0000048;3.97e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,9.68e-15,8;CL:0002579,1.48e-10,3;CL:0000077,1.72e-09,19;CL:0000511,1.37e-08,1;CL:0002625,1.37e-08,1;CL:0000216,1.37e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.45e-09!5;DOID:450!3.45e-09!5;DOID:66!3.45e-09!5;DOID:423!3.45e-09!5;DOID:0080000!3.45e-09!5;DOID:11722!3.45e-09!5;DOID:2394!2.14e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.05e-08;1!UBERON:0001343;2.05e-08;1!UBERON:0004910;2.05e-08;1!UBERON:0004813;2.05e-08;1!UBERON:0001013;2.14e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.37e-08,1;UBERON:0001343,1.37e-08,1;UBERON:0004910,1.37e-08,1;UBERON:0005154,1.37e-08,1;UBERON:0005295,1.37e-08,1;UBERON:0004813,1.37e-08,1;UBERON:0005297,1.37e-08,1;UBERON:0005294,1.37e-08,1;UBERON:0010141,1.37e-08,1;UBERON:0005891,1.37e-08,1;UBERON:0001013,1.74e-08,14 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.00382429529888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0.485618833104395,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0,1.0126579934476,0,0.252433774244115,0.460249493211497,0,0.355009592516614,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0.720599767084807,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.80863626235752,12.2014684204041,1.3996218765488,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,1.01637849688985,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,1.92208723883551,0,1.28683136914886,0,0,0.177561725313127,0.410635780069046,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0.413509717453592,0.429680979473094,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,6.75695884329714,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,5.20111061822734,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,1.19271615249795,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.597019211547496,7.47882591511118,1.66441758450784,3.21985108967651,0.754703705257725,0.889811221596536,8.92476266748002,0.453692771289717,0,0.443565449968902,0,0,0,0.414706207840855,1.32920857278997,0,2.25386413495828,0.761610424337591,0.406870733204662,0.181848659202559,0.214821114084977,1.39210127963548,0,0,1.37358282073117,1.34699795506368,0,0.963099152036517,0,0,0,0.463044948647668,0,0.71635536432595,0,1.75427239662966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,1.21023041222112,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591660003652827,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p6@SMYD3 | |||
}} |
Latest revision as of 22:43, 16 September 2015
Short description: | p6@SMYD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SMYD3_5end |
Coexpression cluster: | C2577_mesenchymal_Fibroblast_Mesothelial_anaplastic_glioma_Preadipocyte_liposarcoma |
Association with transcript: | 19bp_to_uc001ibk.2_5end |
EntrezGene: | SMYD3 |
HGNC: | 15513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 9.68e-15 | 8 |
omentum preadipocyte | 1.48e-10 | 3 |
mesothelial cell | 1.72e-09 | 19 |
androgen binding protein secreting cell | 1.37e-08 | 1 |
seminiferous tubule epithelial cell | 1.37e-08 | 1 |
Sertoli cell | 1.37e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.37e-08 | 1 |
seminiferous tubule of testis | 1.37e-08 | 1 |
epithelium of male gonad | 1.37e-08 | 1 |
epithelial cord | 1.37e-08 | 1 |
sex cord | 1.37e-08 | 1 |
seminiferous tubule epithelium | 1.37e-08 | 1 |
testis sex cord | 1.37e-08 | 1 |
genital ridge | 1.37e-08 | 1 |
primitive sex cord of indifferent gonad | 1.37e-08 | 1 |
coelomic epithelium | 1.37e-08 | 1 |
adipose tissue | 1.74e-08 | 14 |